Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3lbo LDT Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3lbo LDTAldose reductase 1.1.1.21 1.142
3ghu LDTAldose reductase 1.1.1.21 1.111
3ght LDTAldose reductase 1.1.1.21 1.101
3ld5 LDTAldose reductase 1.1.1.21 1.094
3ghs LDTAldose reductase 1.1.1.21 1.080
3ghr LDTAldose reductase 1.1.1.21 1.079
1us0 LDTAldose reductase 1.1.1.21 1.060
2i16 LDTAldose reductase 1.1.1.21 1.060
2i17 LDTAldose reductase 1.1.1.21 1.060
2qxw LDTAldose reductase 1.1.1.21 1.060
3lql LDTAldose reductase 1.1.1.21 1.044
3lz5 LDTAldose reductase 1.1.1.21 1.043
3m4h 388Aldose reductase 1.1.1.21 1.015
2iki 388Aldose reductase 1.1.1.21 0.954
2ikj 393Aldose reductase 1.1.1.21 0.873
3m64 393Aldose reductase 1.1.1.21 0.870
2pzn 393Aldose reductase 1.1.1.21 0.841
2pdc 393Aldose reductase 1.1.1.21 0.824
2pdj 393Aldose reductase 1.1.1.21 0.823
3t42 3T4Aldose reductase 1.1.1.21 0.810
2pdu 393Aldose reductase 1.1.1.21 0.799
3mc5 393Aldose reductase 1.1.1.21 0.791
2dux ZSTAldose reductase 1.1.1.21 0.790
2pdp 393Aldose reductase 1.1.1.21 0.785
1iei ZESAldose reductase 1.1.1.21 0.784
1z3n 3NAAldose reductase 1.1.1.21 0.765
2fz9 ZSTAldose reductase 1.1.1.21 0.749
3mb9 ZSTAldose reductase 1.1.1.21 0.748
2pdh 47DAldose reductase 1.1.1.21 0.744
2pdg 47DAldose reductase 1.1.1.21 0.718
3s3g TLTAldose reductase 1.1.1.21 0.717
2fz8 ZSTAldose reductase 1.1.1.21 0.711
2pdm ZSTAldose reductase 1.1.1.21 0.704
2hvn ZSTAldose reductase 1.1.1.21 0.702
2pdl TOLAldose reductase 1.1.1.21 0.700
2dv0 ZSTAldose reductase 1.1.1.21 0.698
2pd5 ZSTAldose reductase 1.1.1.21 0.696
4gca 2X9Aldose reductase 1.1.1.21 0.696
1frb ZSTAldose reductase-related protein 2 / 0.691
2nvc ITAAldose reductase 1.1.1.21 0.690
3m0i ZSTAldose reductase 1.1.1.21 0.689
2pdi ZSTAldose reductase 1.1.1.21 0.688
2hv5 ZSTAldose reductase 1.1.1.21 0.687
2iqd LPAAldose reductase 1.1.1.21 0.685
3len ZSTAldose reductase 1.1.1.21 0.684
2pdn 47DAldose reductase 1.1.1.21 0.683
1z89 62PAldose reductase 1.1.1.21 0.681
2hvo ZSTAldose reductase 1.1.1.21 0.677
2pdq 47DAldose reductase 1.1.1.21 0.673
2duz ZSTAldose reductase 1.1.1.21 0.672
1pwl BFIAldose reductase 1.1.1.21 0.671
4yu1 53NAldose reductase 1.1.1.21 0.665
2fzd TOLAldose reductase 1.1.1.21 0.653
1u08 PLPMethionine aminotransferase / 0.650