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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3k3j F4C Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3k3j F4CMitogen-activated protein kinase 14 / 1.211
2puu G2GMitogen-activated protein kinase 14 / 0.714
3iw8 HIZMitogen-activated protein kinase 14 / 0.690
3p79 P79Mitogen-activated protein kinase 14 / 0.690
1w83 L11Mitogen-activated protein kinase 14 / 0.689
1kv2 B96Mitogen-activated protein kinase 14 / 0.681
3hv7 1AUMitogen-activated protein kinase 14 / 0.677
3oc1 BMUMitogen-activated protein kinase 14 / 0.675
3d83 GK6Mitogen-activated protein kinase 14 / 0.665
3p78 P78Mitogen-activated protein kinase 14 / 0.662
3f82 353Hepatocyte growth factor receptor 2.7.10.1 0.661
3nnx EDDMitogen-activated protein kinase 14 / 0.657
2p54 735Peroxisome proliferator-activated receptor alpha / 0.656
1wbv LI3Mitogen-activated protein kinase 14 / 0.655
1kv1 BMUMitogen-activated protein kinase 14 / 0.653
3p7a P7AMitogen-activated protein kinase 14 / 0.651