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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3k3i I46 Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3k3i I46Mitogen-activated protein kinase 14 / 1.050
3hll I46Mitogen-activated protein kinase 14 / 0.941
3roc 29BMitogen-activated protein kinase 14 / 0.907
2yis I46Mitogen-activated protein kinase 14 / 0.860
3hl7 I46Mitogen-activated protein kinase 14 / 0.807
4r3c GG5Mitogen-activated protein kinase 14 / 0.696
4f9y GG5Mitogen-activated protein kinase 14 / 0.676
3wfg WFGMineralocorticoid receptor / 0.669
2yi5 YI5Heat shock protein HSP 90-alpha / 0.652