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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3jx2 H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.933
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.925
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.922
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.918
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.912
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.909
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.909
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.908
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.908
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.908
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.907
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.907
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.907
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.903
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.901
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.900
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.892
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.891
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.891
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.890
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.890
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.890
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.889
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.889
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.889
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.889
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.888
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.886
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.886
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.884
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.884
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.884
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.883
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.883
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.881
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.880
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.872
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.872
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.872
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.872
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.872
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.871
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.871
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.871
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.871
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.870
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.870
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.870
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.870
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.870
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.870
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.870
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.870
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.869
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.868
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.867
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.867
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.866
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.865
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.865
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.864
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.864
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.864
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.861
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.859
3png H4BNitric oxide synthase, brain 1.14.13.39 0.856
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.855
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.853
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.852
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.852
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.852
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.851
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.851
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.851
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.849
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.849
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.849
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.840
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.837
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.835
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.834
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.834
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.832
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.832
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.830
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.824
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.822
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.821
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.817
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.807
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.807
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.806
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.804
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.795
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.794
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.784
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.756
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.724
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.709
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.709
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.706
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.682
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.680
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.679
1m8i H4BNitric oxide synthase, inducible 1.14.13.39 0.665
4e5f 0N7Polymerase acidic protein / 0.660
2nod H4BNitric oxide synthase, inducible 1.14.13.39 0.653
3nod H4BNitric oxide synthase, inducible 1.14.13.39 0.653