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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3jt6 H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.948
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.940
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.926
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.925
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.925
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.924
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.924
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.924
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.924
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.923
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.923
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.923
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.923
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.907
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.907
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.906
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.906
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.906
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.905
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.905
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.903
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.903
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.903
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.903
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.902
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.902
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.898
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.894
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.893
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.891
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.891
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.890
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.889
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.889
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.888
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.888
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.887
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.887
3png H4BNitric oxide synthase, brain 1.14.13.39 0.887
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.887
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.886
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.886
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.886
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.886
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.886
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.885
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.884
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.884
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.884
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.883
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.882
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.880
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.875
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.874
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.871
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.870
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.870
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.869
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.868
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.867
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.867
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.867
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.863
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.862
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.856
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.855
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.854
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.853
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.853
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.852
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.850
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.849
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.847
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.846
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.844
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.843
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.839
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.839
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.836
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.835
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.835
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.832
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.832
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.831
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.825
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.807
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.804
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.799
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.797
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.793
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.792
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.779
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.776
4e5i 0N9Polymerase acidic protein / 0.744
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.735
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.716
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.712
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.707
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.694
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.692
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.683
3nw2 H4BNitric oxide synthase, inducible 1.14.13.39 0.675
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.672
4e5f 0N7Polymerase acidic protein / 0.660