Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ik9 BOB Glutathione S-transferase A1 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3ik9 BOBGlutathione S-transferase A1 2.5.1.18 1.444
1k3y GTXGlutathione S-transferase A1 2.5.1.18 0.847
1pl2 ABYGlutathione S-transferase A1 2.5.1.18 0.823
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.822
3ktl GTXGlutathione S-transferase A1 2.5.1.18 0.810
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.768
2r3x GTXGlutathione S-transferase A1 2.5.1.18 0.763
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.754
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.735
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.721
3l0h GTXGlutathione S-transferase A1 2.5.1.18 0.713
1gnw GTXGlutathione S-transferase F2 2.5.1.18 0.701
3ik7 BOBGlutathione S-transferase A4 2.5.1.18 0.694
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.689
2imk GTXAGAP009194-PA / 0.685
5agy GTBTau class glutathione S-transferase / 0.683
1k3l GTXGlutathione S-transferase A1 2.5.1.18 0.680
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.674
1bx9 GLY_GGL_FOEGlutathione S-transferase F2 2.5.1.18 0.674
1k0c GTBTranscriptional regulator URE2 / 0.672
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.664
2aaw GTXGlutathione S-transferase 2.5.1.18 0.663
3f63 GTXGlutathione transferase GST1-4 / 0.660
1gsu GTXGlutathione S-transferase 2 2.5.1.18 0.656
4hj2 LZ6Glutathione S-transferase A1 2.5.1.18 0.656
3pgt GBXGlutathione S-transferase P 2.5.1.18 0.654
3g7j GTXGlutathione transferase GST1-4 / 0.653
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.652