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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ik7 BOB Glutathione S-transferase A4 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3ik7 BOBGlutathione S-transferase A4 2.5.1.18 1.220
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.936
4hj2 LZ6Glutathione S-transferase A1 2.5.1.18 0.816
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.772
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.765
1pgt GTXGlutathione S-transferase P 2.5.1.18 0.756
2aaw GTXGlutathione S-transferase 2.5.1.18 0.755
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.745
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.741
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.736
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.736
3l0h GTXGlutathione S-transferase A1 2.5.1.18 0.734
3pgt GBXGlutathione S-transferase P 2.5.1.18 0.730
3g7j GTXGlutathione transferase GST1-4 / 0.726
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.725
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.718
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.713
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.707
1vf2 GTXGlutathione S-transferase 3 2.5.1.18 0.706
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.703
1pl2 ABYGlutathione S-transferase A1 2.5.1.18 0.702
1k0c GTBTranscriptional regulator URE2 / 0.700
1pl1 ABYGlutathione S-transferase A1 2.5.1.18 0.700
3ik9 BOBGlutathione S-transferase A1 2.5.1.18 0.694
1k3l GTXGlutathione S-transferase A1 2.5.1.18 0.693
3ktl GTXGlutathione S-transferase A1 2.5.1.18 0.693
2f3m GTDGlutathione S-transferase Mu 1 2.5.1.18 0.685
2c4j GSOGlutathione S-transferase Mu 2 2.5.1.18 0.678
2r3x GTXGlutathione S-transferase A1 2.5.1.18 0.674
1k3y GTXGlutathione S-transferase A1 2.5.1.18 0.664
1bx9 GLY_GGL_FOEGlutathione S-transferase F2 2.5.1.18 0.658
5agy GTBTau class glutathione S-transferase / 0.656
2vo4 GTB2,4-D inducible glutathione S-transferase / 0.654
1gwc GTXGlutathione S-transferase 1 / 0.653
2gsq GBIGlutathione S-transferase 2.5.1.18 0.652