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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3hub 469 Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3hub 469Mitogen-activated protein kinase 14 / 1.043
3zsh 469Mitogen-activated protein kinase 14 / 0.758
3fl4 FL4Mitogen-activated protein kinase 14 / 0.737
2ewa SB2Mitogen-activated protein kinase 14 / 0.684
1zyj BI5Mitogen-activated protein kinase 14 / 0.683
1m7q DQOMitogen-activated protein kinase 14 / 0.673
3kf7 L9GMitogen-activated protein kinase 14 / 0.668
3fmm XI2Mitogen-activated protein kinase 14 / 0.666
1efz PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
1m3q ANGN-glycosylase/DNA lyase 3.2.2 0.660
4e5i 0N9Polymerase acidic protein / 0.660
4e5l DBHPolymerase acidic protein / 0.660
3hp2 P36Mitogen-activated protein kinase 14 / 0.659
3mpt 1GKMitogen-activated protein kinase 14 / 0.656
3gc7 B45Mitogen-activated protein kinase 14 / 0.655
3fc1 52PMitogen-activated protein kinase 14 / 0.654
1ove 358Mitogen-activated protein kinase 14 / 0.652