scPDB - Distribution of Binding mode Similarity values of 3h9j entry / Site 6

Distribution of Interaction pattern similarity measured by Grim

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Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3h9j	APC	MccB protein

Complex with similar interaction patterns:

PDB ID	HET	Uniprot Name	EC Number	Binding Mode Similarity
3h9j	APC	MccB protein	/	0.895
3h5n	ATP	MccB protein	/	0.746
4rdi	ATP	tRNA threonylcarbamoyladenosine dehydratase	6.1	0.700
4d79	ATP	tRNA threonylcarbamoyladenosine dehydratase	6.1	0.692
2yy7	NAD	L-threonine dehydrogenase	/	0.655