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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ghu LDT Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3ghu LDTAldose reductase 1.1.1.21 1.125
3lbo LDTAldose reductase 1.1.1.21 1.111
3ght LDTAldose reductase 1.1.1.21 1.105
3ld5 LDTAldose reductase 1.1.1.21 1.071
3ghr LDTAldose reductase 1.1.1.21 1.066
3ghs LDTAldose reductase 1.1.1.21 1.066
2qxw LDTAldose reductase 1.1.1.21 1.049
1us0 LDTAldose reductase 1.1.1.21 1.046
2i16 LDTAldose reductase 1.1.1.21 1.046
2i17 LDTAldose reductase 1.1.1.21 1.046
3lz5 LDTAldose reductase 1.1.1.21 1.031
3lql LDTAldose reductase 1.1.1.21 1.024
3m4h 388Aldose reductase 1.1.1.21 1.015
2iki 388Aldose reductase 1.1.1.21 0.931
2ikj 393Aldose reductase 1.1.1.21 0.876
2pdj 393Aldose reductase 1.1.1.21 0.826
3m64 393Aldose reductase 1.1.1.21 0.826
2pzn 393Aldose reductase 1.1.1.21 0.822
3t42 3T4Aldose reductase 1.1.1.21 0.810
2pdc 393Aldose reductase 1.1.1.21 0.808
3mc5 393Aldose reductase 1.1.1.21 0.801
1iei ZESAldose reductase 1.1.1.21 0.799
2dux ZSTAldose reductase 1.1.1.21 0.775
1t40 ID5Aldose reductase 1.1.1.21 0.773
4gca 2X9Aldose reductase 1.1.1.21 0.760
1pwl BFIAldose reductase 1.1.1.21 0.758
2pdp 393Aldose reductase 1.1.1.21 0.756
2pdu 393Aldose reductase 1.1.1.21 0.752
2dv0 ZSTAldose reductase 1.1.1.21 0.742
2pdm ZSTAldose reductase 1.1.1.21 0.730
1z3n 3NAAldose reductase 1.1.1.21 0.722
2pdg 47DAldose reductase 1.1.1.21 0.721
2pdh 47DAldose reductase 1.1.1.21 0.720
3s3g TLTAldose reductase 1.1.1.21 0.718
2pdq 47DAldose reductase 1.1.1.21 0.713
3g5e Q74Aldose reductase 1.1.1.21 0.713
2pdn 47DAldose reductase 1.1.1.21 0.710
2inz OHPAldose reductase 1.1.1.21 0.709
2pd5 ZSTAldose reductase 1.1.1.21 0.700
2pdl TOLAldose reductase 1.1.1.21 0.698
2hvn ZSTAldose reductase 1.1.1.21 0.696
2nvc ITAAldose reductase 1.1.1.21 0.690
2iqd LPAAldose reductase 1.1.1.21 0.686
1frb ZSTAldose reductase-related protein 2 / 0.684
2hv5 ZSTAldose reductase 1.1.1.21 0.684
3m0i ZSTAldose reductase 1.1.1.21 0.683
1z89 62PAldose reductase 1.1.1.21 0.680
2ikh LITAldose reductase 1.1.1.21 0.679
2hvo ZSTAldose reductase 1.1.1.21 0.676
1t41 ID5Aldose reductase 1.1.1.21 0.672
2fzd TOLAldose reductase 1.1.1.21 0.670
5liu 388Aldo-keto reductase family 1 member B10 1.1.1 0.664