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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3gcq 1BU Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3gcq 1BUMitogen-activated protein kinase 14 / 1.256
3hv3 R49Mitogen-activated protein kinase 14 / 1.120
3uvr 06FMitogen-activated protein kinase 14 / 0.880
3hv6 R39Mitogen-activated protein kinase 14 / 0.861
3nnx EDDMitogen-activated protein kinase 14 / 0.858
1w82 L10Mitogen-activated protein kinase 14 / 0.842
3hv7 1AUMitogen-activated protein kinase 14 / 0.834
3lfe Z84Mitogen-activated protein kinase 14 / 0.816
3lff Z83Mitogen-activated protein kinase 14 / 0.813
3nnw EDDMitogen-activated protein kinase 14 / 0.812
2yiw YIWMitogen-activated protein kinase 14 / 0.795
3qri 919Tyrosine-protein kinase ABL1 2.7.10.2 0.792
3lfb Z87Mitogen-activated protein kinase 14 / 0.772
3gcu R48Mitogen-activated protein kinase 14 / 0.769
4k9y K9YFocal adhesion kinase 1 2.7.10.2 0.769
3hv4 L51Mitogen-activated protein kinase 14 / 0.757
4f7j 0SUCyclin-dependent kinase 8 2.7.11.22 0.756
3gcv SS6Mitogen-activated protein kinase 14 / 0.750
4kao KAOFocal adhesion kinase 1 2.7.10.2 0.749
4f7n 0SVCyclin-dependent kinase 8 2.7.11.22 0.739
3npc B96Mitogen-activated protein kinase 9 2.7.11.24 0.737
4f6w 0SSCyclin-dependent kinase 8 2.7.11.22 0.735
4h1m 0YJProtein-tyrosine kinase 2-beta 2.7.10.2 0.733
3wze BAXVascular endothelial growth factor receptor 2 2.7.10.1 0.723
2puu G2GMitogen-activated protein kinase 14 / 0.718
3pg3 DG7Mitogen-activated protein kinase 14 / 0.715
3p7c P7CMitogen-activated protein kinase 14 / 0.714
4neu Q1AReceptor-interacting serine/threonine-protein kinase 1 2.7.11.1 0.708
2yis YISMitogen-activated protein kinase 14 / 0.706
3hv5 R24Mitogen-activated protein kinase 14 / 0.698
3nnu EDBMitogen-activated protein kinase 14 / 0.696
4f70 0STCyclin-dependent kinase 8 2.7.11.22 0.696
1wbn L09Mitogen-activated protein kinase 14 / 0.694
1kv2 B96Mitogen-activated protein kinase 14 / 0.692
3rgf BAXCyclin-dependent kinase 8 2.7.11.22 0.692
5hi2 BAXSerine/threonine-protein kinase B-raf 2.7.11.1 0.689
3gcs BAXMitogen-activated protein kinase 14 / 0.688
3o8p BMUMitogen-activated protein kinase 14 / 0.688
4f6s 0SQCyclin-dependent kinase 8 2.7.11.22 0.682
3p78 P78Mitogen-activated protein kinase 14 / 0.674
1kv1 BMUMitogen-activated protein kinase 14 / 0.668
3p7a P7AMitogen-activated protein kinase 14 / 0.666
4asd BAXVascular endothelial growth factor receptor 2 2.7.10.1 0.660
1w83 L11Mitogen-activated protein kinase 14 / 0.659
4f7l 0SOCyclin-dependent kinase 8 2.7.11.22 0.657
3p79 P79Mitogen-activated protein kinase 14 / 0.655