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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3g7j GTX Glutathione transferase GST1-4

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3g7j GTXGlutathione transferase GST1-4 / 1.111
1pn9 GTXGlutathione S-transferase 1, isoform D 2.5.1.18 0.813
3f63 GTXGlutathione transferase GST1-4 / 0.804
3frc 0HGGlutathione S-transferase 2.5.1.18 0.733
3ik7 BOBGlutathione S-transferase A4 2.5.1.18 0.726
1k0c GTBTranscriptional regulator URE2 / 0.718
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.718
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.701
1gwc GTXGlutathione S-transferase 1 / 0.701
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.699
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.699
1hna GDNGlutathione S-transferase Mu 2 2.5.1.18 0.698
2imk GTXAGAP009194-PA / 0.697
2c4j GSOGlutathione S-transferase Mu 2 2.5.1.18 0.692
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.677
5agy GTBTau class glutathione S-transferase / 0.676
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.675
2vo4 GTB2,4-D inducible glutathione S-transferase / 0.674
2f3m GTDGlutathione S-transferase Mu 1 2.5.1.18 0.667
3gur BYGGlutathione S-transferase Mu 2 2.5.1.18 0.666
1pgt GTXGlutathione S-transferase P 2.5.1.18 0.662
6gsx GPSGlutathione S-transferase Mu 1 2.5.1.18 0.662
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.654
3ik9 BOBGlutathione S-transferase A1 2.5.1.18 0.653
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.651