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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3fsf FSS Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3fsf FSSMitogen-activated protein kinase 14 / 0.914
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
1m3q ANGN-glycosylase/DNA lyase 3.2.2 0.744
1v2h GUNPurine nucleoside phosphorylase 2.4.2.1 0.744
4e5i 0N9Polymerase acidic protein / 0.744
4e5l DBHPolymerase acidic protein / 0.744
4ek9 EP4Histone-lysine N-methyltransferase, H3 lysine-79 specific 2.1.1.43 0.744
3fkl FKLMitogen-activated protein kinase 14 / 0.743
3fsk RO6Mitogen-activated protein kinase 14 / 0.720
4aa5 NQBMitogen-activated protein kinase 14 / 0.711
2hzi JINTyrosine-protein kinase ABL1 2.7.10.2 0.700
2bak AQZMitogen-activated protein kinase 14 / 0.693
4a9y AQZMitogen-activated protein kinase 14 / 0.693
4kiq 1RAMitogen-activated protein kinase 14 / 0.688
4kip 1R9Mitogen-activated protein kinase 14 / 0.686
3ocg OCGMitogen-activated protein kinase 14 / 0.682
3mvm 39PMitogen-activated protein kinase 14 / 0.679
2gtm LIDMitogen-activated protein kinase 14 / 0.677
2zva 1N1Tyrosine-protein kinase Lyn 2.7.10.2 0.673
2zyb KSLTyrosine-protein kinase Lck 2.7.10.2 0.672
4xey 1N1Tyrosine-protein kinase ABL1 2.7.10.2 0.672
2g2h P16Tyrosine-protein kinase ABL1 2.7.10.2 0.671
2y6o 1N1Ephrin type-A receptor 4 2.7.10.1 0.671
4aac AAVMitogen-activated protein kinase 14 / 0.671
1ozq PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1p0e PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
2pot GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
2rg6 287Mitogen-activated protein kinase 14 / 0.660
2z1x PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
3bld PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4e5f 0N7Polymerase acidic protein / 0.660
4gcx PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4h7z GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4hqv QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4hvx QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
2zm1 KSFTyrosine-protein kinase Lck 2.7.10.2 0.659
1wbn L09Mitogen-activated protein kinase 14 / 0.653
3s4q NK0Mitogen-activated protein kinase 14 / 0.653
3e92 G6AMitogen-activated protein kinase 14 / 0.652
2bal PQAMitogen-activated protein kinase 14 / 0.651
2xyu Q9GEphrin type-A receptor 4 2.7.10.1 0.650