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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3fmj FMJ Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3fmj FMJMitogen-activated protein kinase 14 / 0.906
4loq SB4Mitogen-activated protein kinase 14 / 0.746
1bl7 SB4Mitogen-activated protein kinase 14 / 0.737
3mpa SB2Mitogen-activated protein kinase 14 / 0.719
3gcp SB2Mitogen-activated protein kinase 14 / 0.717
4loo SB4Mitogen-activated protein kinase 14 / 0.711
1wbw LI4Mitogen-activated protein kinase 14 / 0.707
1ywr LI9Mitogen-activated protein kinase 14 / 0.698
1yw2 PGJMitogen-activated protein kinase 14 / 0.687
1tvo FRZMitogen-activated protein kinase 1 2.7.11.24 0.680
4jrv KJVEpidermal growth factor receptor 2.7.10.1 0.680
4eh5 0OMMitogen-activated protein kinase 14 / 0.664
2ewa SB2Mitogen-activated protein kinase 14 / 0.662
3uyt 0CKCasein kinase I isoform delta 2.7.11.1 0.661
3uzp 0CKCasein kinase I isoform delta 2.7.11.1 0.661
2ghl LIBMitogen-activated protein kinase 14 / 0.656
3iw8 HIZMitogen-activated protein kinase 14 / 0.654
4eh7 0OOMitogen-activated protein kinase 14 / 0.652