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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3fly FLY Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3fly FLYMitogen-activated protein kinase 14 / 0.963
3flw FLWMitogen-activated protein kinase 14 / 0.909
3fmh 533Mitogen-activated protein kinase 14 / 0.906
3fmk FMKMitogen-activated protein kinase 14 / 0.813
3fi4 FI4Mitogen-activated protein kinase 14 / 0.795
3flz FLZMitogen-activated protein kinase 14 / 0.774
3fkn FKNMitogen-activated protein kinase 14 / 0.742
3fmm XI2Mitogen-activated protein kinase 14 / 0.731
3que 3FFMitogen-activated protein kinase 14 / 0.716
3fko FKOMitogen-activated protein kinase 14 / 0.706
3fsk RO6Mitogen-activated protein kinase 14 / 0.705
3fln 3FNMitogen-activated protein kinase 14 / 0.700
3hp5 52PMitogen-activated protein kinase 14 / 0.672
3fml FMLMitogen-activated protein kinase 14 / 0.669
3flq 891Mitogen-activated protein kinase 14 / 0.668
3hll I45Mitogen-activated protein kinase 14 / 0.665
3obg SB2Mitogen-activated protein kinase 14 / 0.660
3roc 29AMitogen-activated protein kinase 14 / 0.660
3kf7 L9GMitogen-activated protein kinase 14 / 0.659
3nww 3NWMitogen-activated protein kinase 14 / 0.659
3ha8 5JZMitogen-activated protein kinase 14 / 0.657
1yw2 PGJMitogen-activated protein kinase 14 / 0.650
2gtn LIEMitogen-activated protein kinase 14 / 0.650
3gc8 B45Mitogen-activated protein kinase 11 2.7.11.24 0.650
4loo SB4Mitogen-activated protein kinase 14 / 0.650