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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3e7g H4B Nitric oxide synthase, inducible 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.756
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.720
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.696
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.689
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.679
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.678
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.678
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.678
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.677
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.676
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.676
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.675
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.675
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.674
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.674
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.673
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.672
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.672
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.672
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.669
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.669
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.668
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.668
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.664
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.661
1qom H4BNitric oxide synthase, inducible 1.14.13.39 0.659
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.658
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.657
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.657
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.653