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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3dwj H4B Nitric oxide synthase, inducible 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.770
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.728
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.725
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.721
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.720
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.716
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.716
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.716
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.715
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.715
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.714
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.714
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.714
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.714
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.714
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.713
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.713
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.713
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.713
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.712
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.712
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.712
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.710
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.710
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.710
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.710
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.709
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.709
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.709
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.709
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.708
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.708
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.708
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.708
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.707
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.707
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.706
3nw2 H4BNitric oxide synthase, inducible 1.14.13.39 0.706
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.706
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.704
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.703
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.701
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.699
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.699
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.699
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.697
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.696
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.696
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.696
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.695
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.694
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.693
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.693
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.693
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.693
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.692
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.692
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.689
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.687
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.676
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.676
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.675
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.671
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.671
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.669
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.663
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.650