Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3dr8 ACO L-methionine sulfoximine/L-methionine sulfone acetyltransferase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3dr8 ACOL-methionine sulfoximine/L-methionine sulfone acetyltransferase / 1.374
4jwp ACOGCN5-related N-acetyltransferase / 0.983
2vez ACOGlucosamine 6-phosphate acetyltransferase, putative / 0.858
3f8k COAUncharacterized protein / 0.825
2bei ACODiamine acetyltransferase 2 2.3.1.57 0.822
1tiq COASpermidine/spermine N(1)-acetyltransferase / 0.810
4jxr ACOAcetyltransferase / 0.807
2cns ACORibosomal-protein-alanine acetyltransferase / 0.803
1i12 ACOGlucosamine 6-phosphate N-acetyltransferase / 0.799
1bob ACOHistone acetyltransferase type B catalytic subunit / 0.750
1cjw COTSerotonin N-acetyltransferase / 0.746
2x7b COAN-alpha-acetyltransferase 2.3.1 0.745
1m4d COAAminoglycoside 2'-N-acetyltransferase 2.3.1 0.741
3pgp ACOUncharacterized protein / 0.739
1kuv CA5Serotonin N-acetyltransferase / 0.731
2a4n COAAac(6')-Ii protein / 0.730
3zj0 ACOPutative acetyltransferase OgpAT / 0.729
2vqy ACOAAC(6')-Ib / 0.723
3d2p COAAmino-acid acetyltransferase / 0.723
4kub COAUncharacterized protein / 0.723
2cnt COARibosomal-protein-alanine acetyltransferase / 0.721
2q4v ACODiamine acetyltransferase 2 2.3.1.57 0.721
4r3k COAN-alpha-acetyltransferase 2.3.1 0.721
4ava ACOAcetyltransferase Pat 2.3.1 0.718
3gya COAGCN5-related N-acetyltransferase / 0.715
3gy9 COAGCN5-related N-acetyltransferase / 0.704
4ag9 COAGlucosamine 6-phosphate N-acetyltransferase / 0.703
4u9y COAAlpha-tubulin N-acetyltransferase 1 / 0.696
4kvx ACON-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 0.694
1kuy COTSerotonin N-acetyltransferase / 0.693
3fbu COAAcetyltransferase, GNAT family / 0.693
3mgd ACOPredicted acetyltransferase / 0.693
2ozg COAGCN5-related N-acetyltransferase / 0.691
1ib1 COTSerotonin N-acetyltransferase / 0.689
1l0c COTSerotonin N-acetyltransferase / 0.689
1qsm ACOHistone acetyltransferase HPA2 / 0.686
1n71 COAAac(6')-Ii protein / 0.684
1j4j ACOAcetyltransferase 2.3.1 0.683
1ozp ACOMycothiol acetyltransferase 2.3.1.189 0.677
2giv ACOHistone acetyltransferase KAT8 / 0.675
4lx9 ACON-alpha-acetyltransferase 2.3.1 0.669
1b87 ACOAac(6')-Ii protein / 0.668
2vbq BSJAminoglycoside N(6')-acetyltransferase type 1 / 0.666
4r87 COASpermidine N(1)-acetyltransferase / 0.664
4mxe ACON-acetyltransferase ESCO1 2.3.1 0.661
2o28 COAGlucosamine 6-phosphate N-acetyltransferase / 0.660
2jdd ACOProbable acetyltransferase / 0.659
3k9u ACOSpermidine N(1)-acetyltransferase / 0.659
2y0m ACOHistone acetyltransferase KAT8 / 0.657
3te4 ACODopamine N-acetyltransferase / 0.656
3sxn COAN-acetyltransferase Eis / 0.654
4if5 ACOAlpha-tubulin N-acetyltransferase 1 / 0.653
5kf1 COAPredicted acetyltransferase / 0.653
2c27 ACOMycothiol acetyltransferase 2.3.1.189 0.652
4r57 ACOSpermidine N(1)-acetyltransferase / 0.651