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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3cqe P91 Wee1-like protein kinase 2.7.10.2

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3cqe P91Wee1-like protein kinase 2.7.10.2 1.086
3bi6 396Wee1-like protein kinase 2.7.10.2 0.879
3cr0 809Wee1-like protein kinase 2.7.10.2 0.873
2in6 839Wee1-like protein kinase 2.7.10.2 0.867
3biz 61EWee1-like protein kinase 2.7.10.2 0.860
2z2w 770Wee1-like protein kinase 2.7.10.2 0.834
2io6 330Wee1-like protein kinase 2.7.10.2 0.808
1x8b 824Wee1-like protein kinase 2.7.10.2 0.807
2j0j 4STFocal adhesion kinase 1 2.7.10.2 0.724
2j0m 4STFocal adhesion kinase 1 2.7.10.2 0.712
3cbl STUTyrosine-protein kinase Fes/Fps 2.7.10.2 0.708
3cd3 STUTyrosine-protein kinase Fes/Fps 2.7.10.2 0.703
4fv9 E71Mitogen-activated protein kinase 1 2.7.11.24 0.686
2gcd STUSerine/threonine-protein kinase TAO2 2.7.11.1 0.685
4c58 824Cyclin-G-associated kinase 2.7.11.1 0.682
3bkb STUTyrosine-protein kinase Fes/Fps 2.7.10.2 0.671
5hes 032Mitogen-activated protein kinase kinase kinase 20 2.7.11.25 0.662
2hy8 1STSerine/threonine-protein kinase PAK 1 2.7.11.1 0.654
3mtf A3FActivin receptor type-1 2.7.11.30 0.652
1sm2 STUTyrosine-protein kinase ITK/TSK 2.7.10.2 0.650
3itz P66Mitogen-activated protein kinase 14 / 0.650