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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3chs 4BU Leukotriene A-4 hydrolase 3.3.2.6

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3chs 4BULeukotriene A-4 hydrolase 3.3.2.6 1.183
3chr 4BSLeukotriene A-4 hydrolase 3.3.2.6 0.868
3fui 812Leukotriene A-4 hydrolase 3.3.2.6 0.759
3fu5 492Leukotriene A-4 hydrolase 3.3.2.6 0.704
3fuf BESLeukotriene A-4 hydrolase 3.3.2.6 0.689
4k5o 1OTM1 family aminopeptidase 3.4.11 0.679
3fuh BESLeukotriene A-4 hydrolase 3.3.2.6 0.678
3cho 4BGLeukotriene A-4 hydrolase 3.3.2.6 0.664
4rsy B3NLeukotriene A-4 hydrolase 3.3.2.6 0.663
2dqm BESAminopeptidase N 3.4.11.2 0.653
4gaa BESLeukotriene A(4) hydrolase / 0.650