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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3bv2 P38 Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3bv2 P38Mitogen-activated protein kinase 14 / 1.539
3kq7 KQ7Mitogen-activated protein kinase 14 / 0.940
3bv3 P39Mitogen-activated protein kinase 14 / 0.922
3d83 GK6Mitogen-activated protein kinase 14 / 0.849
1wbt WBTMitogen-activated protein kinase 14 / 0.828
1w83 L11Mitogen-activated protein kinase 14 / 0.813
2bak AQZMitogen-activated protein kinase 14 / 0.812
4a9y AQZMitogen-activated protein kinase 14 / 0.812
2e2b 406Tyrosine-protein kinase ABL1 2.7.10.2 0.771
5hid B1ESerine/threonine-protein kinase B-raf 2.7.11.1 0.771
1wbv LI3Mitogen-activated protein kinase 14 / 0.767
4ckr DI1Epithelial discoidin domain-containing receptor 1 2.7.10.1 0.751
1iep STITyrosine-protein kinase ABL1 2.7.10.2 0.740
4bkj STIEpithelial discoidin domain-containing receptor 1 2.7.10.1 0.738
2rg6 287Mitogen-activated protein kinase 14 / 0.734
3gvu STIAbelson tyrosine-protein kinase 2 2.7.10.2 0.724
2hyy STITyrosine-protein kinase ABL1 2.7.10.2 0.720
4r7i STIMacrophage colony-stimulating factor 1 receptor 2.7.10.1 0.715
4kip 1R9Mitogen-activated protein kinase 14 / 0.714
3e93 19BMitogen-activated protein kinase 14 / 0.711
2oiq STIProto-oncogene tyrosine-protein kinase Src 2.7.10.2 0.709
3hv4 L51Mitogen-activated protein kinase 14 / 0.704
1wbn L09Mitogen-activated protein kinase 14 / 0.702
3o8u BMUMitogen-activated protein kinase 14 / 0.702
4ksp 1SUSerine/threonine-protein kinase B-raf 2.7.11.1 0.700
3bx5 304Mitogen-activated protein kinase 14 / 0.699
3iph G11Mitogen-activated protein kinase 14 / 0.699
3p78 P78Mitogen-activated protein kinase 14 / 0.694
4fc0 0T2Serine/threonine-protein kinase B-raf 2.7.11.1 0.694
3gcu R48Mitogen-activated protein kinase 14 / 0.692
1wbs LI2Mitogen-activated protein kinase 14 / 0.689
3gi3 B10Mitogen-activated protein kinase 14 / 0.687
3hv5 R24Mitogen-activated protein kinase 14 / 0.685
3oc1 BMUMitogen-activated protein kinase 14 / 0.684
3o8t BMUMitogen-activated protein kinase 14 / 0.677
3vnt 0JAVascular endothelial growth factor receptor 2 2.7.10.1 0.674
2zb0 GK3Mitogen-activated protein kinase 14 / 0.671
3uvr 06FMitogen-activated protein kinase 14 / 0.666
1kv1 BMUMitogen-activated protein kinase 14 / 0.665
3p7c P7CMitogen-activated protein kinase 14 / 0.665
4i5h G17Mitogen-activated protein kinase 1 2.7.11.24 0.664
3hv7 1AUMitogen-activated protein kinase 14 / 0.660
4u0i 0LIMast/stem cell growth factor receptor Kit 2.7.10.1 0.658
3vo3 0KFVascular endothelial growth factor receptor 2 2.7.10.1 0.655
3uvq FS8Mitogen-activated protein kinase 14 / 0.652
2hiw 7MPTyrosine-protein kinase ABL1 2.7.10.2 0.650