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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3akl ANP Serine/threonine-protein kinase CtkA 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3akl ANPSerine/threonine-protein kinase CtkA 2.7.11.1 1.056
3akk ADPSerine/threonine-protein kinase CtkA 2.7.11.1 0.780
3akl ADPSerine/threonine-protein kinase CtkA 2.7.11.1 0.726
4wzy ATPMaltokinase 2.7.1.175 0.694
3lmh ADPMyosin heavy chain kinase A 2.7.11.7 0.680
5cno ANPEpidermal growth factor receptor 2.7.10.1 0.672
3vjo ANPEpidermal growth factor receptor 2.7.10.1 0.664
2itv ANPEpidermal growth factor receptor 2.7.10.1 0.653
2itn ANPEpidermal growth factor receptor 2.7.10.1 0.652
4zs4 ATPMyosin heavy chain kinase A 2.7.11.7 0.652
3w0r ANPHygromycin-B 4-O-kinase 2.7.1.163 0.651
2vqd AP2Biotin carboxylase 6.3.4.14 0.650