sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2zw5 | COA | Bleomycin acetyltransferase |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 2zw5 | COA | Bleomycin acetyltransferase | / | 1.056 | |
| 2zw4 | COA | Bleomycin acetyltransferase | / | 0.837 | |
| 4lx9 | ACO | N-alpha-acetyltransferase | 2.3.1 | 0.738 | |
| 4kvx | ACO | N-terminal acetyltransferase A complex catalytic subunit ard1 | 2.3.1.88 | 0.700 | |
| 1s5k | COA | Aminoglycoside N(6')-acetyltransferase type 1 | / | 0.699 | |
| 3mgd | ACO | Predicted acetyltransferase | / | 0.690 | |
| 2x7b | COA | N-alpha-acetyltransferase | 2.3.1 | 0.687 | |
| 4r3k | COA | N-alpha-acetyltransferase | 2.3.1 | 0.672 | |
| 4qvt | ACO | Acetyltransferase YpeA | 2.3.1 | 0.671 | |
| 4xnh | ACO | N-terminal acetyltransferase A complex subunit NAT5 | 2.3.1 | 0.668 | |
| 3sxn | COA | N-acetyltransferase Eis | / | 0.666 | |
| 5kgh | ACO | Predicted acetyltransferase | / | 0.664 | |
| 2cns | ACO | Ribosomal-protein-alanine acetyltransferase | / | 0.663 | |
| 1cm0 | COA | Histone acetyltransferase KAT2B | 2.3.1.48 | 0.661 | |
| 5kgj | ACO | Predicted acetyltransferase | / | 0.652 | |
| 1qsm | ACO | Histone acetyltransferase HPA2 | / | 0.651 | |
| 4ag7 | COA | Glucosamine 6-phosphate N-acetyltransferase | / | 0.650 |