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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2zw4 COA Bleomycin acetyltransferase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2zw4 COABleomycin acetyltransferase / 1.372
2zw5 COABleomycin acetyltransferase / 0.837
4lx9 ACON-alpha-acetyltransferase 2.3.1 0.757
3fbu COAAcetyltransferase, GNAT family / 0.716
2r8v ACOAmino-acid acetyltransferase / 0.712
2cns ACORibosomal-protein-alanine acetyltransferase / 0.709
3mgd ACOPredicted acetyltransferase / 0.699
1ozp ACOMycothiol acetyltransferase 2.3.1.189 0.695
2fiw ACOGCN5-related N-acetyltransferase:Aminotransferase, class-II / 0.683
4r3k COAN-alpha-acetyltransferase 2.3.1 0.683
4qvt ACOAcetyltransferase YpeA 2.3.1 0.678
1p0h COAMycothiol acetyltransferase 2.3.1.189 0.670
2x7b COAN-alpha-acetyltransferase 2.3.1 0.668
3pgp ACOUncharacterized protein / 0.664
2ob0 ACON-alpha-acetyltransferase 50 / 0.663
1s7l COAAcetyl transferase / 0.662
2c27 ACOMycothiol acetyltransferase 2.3.1.189 0.658
4kvx ACON-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 0.657
5kgp ACOPredicted acetyltransferase / 0.656
4jwp ACOGCN5-related N-acetyltransferase / 0.655
3te4 ACODopamine N-acetyltransferase / 0.652
5c88 COAN-alpha-acetyltransferase / 0.652
4a33 MYAGlycylpeptide N-tetradecanoyltransferase / 0.651
1j4j ACOAcetyltransferase 2.3.1 0.650
2o28 COAGlucosamine 6-phosphate N-acetyltransferase / 0.650