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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2z4j DHT Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2z4j DHTAndrogen receptor / 1.193
2piv DHTAndrogen receptor / 1.125
2qpy DHTAndrogen receptor / 1.117
1t7t DHTAndrogen receptor / 1.111
1t7f DHTAndrogen receptor / 1.107
1t63 DHTAndrogen receptor / 1.105
1t7m DHTAndrogen receptor / 1.097
1t7r DHTAndrogen receptor / 1.095
4oez DHTAndrogen receptor / 1.079
4k7a DHTAndrogen receptor / 1.078
1t76 DHTAndrogen receptor / 1.073
4ofu DHTAndrogen receptor / 1.068
4oed DHTAndrogen receptor / 1.067
2piw DHTAndrogen receptor / 1.061
1t5z DHTAndrogen receptor / 1.060
2pir DHTAndrogen receptor / 1.057
1t73 DHTAndrogen receptor / 1.051
1t79 DHTAndrogen receptor / 1.043
2pkl DHTAndrogen receptor / 1.043
2ama DHTAndrogen receptor / 1.030
2pip DHTAndrogen receptor / 1.024
1t74 DHTAndrogen receptor / 1.023
2pit DHTAndrogen receptor / 1.019
2piq DHTAndrogen receptor / 1.010
1t65 DHTAndrogen receptor / 0.989
2q7i TESAndrogen receptor / 0.979
4oea DHTAndrogen receptor / 0.977
2ylo TESAndrogen receptor / 0.973
4ofr DHTAndrogen receptor / 0.973
3zqt TESAndrogen receptor / 0.964
2pio DHTAndrogen receptor / 0.960
2ylq TESAndrogen receptor / 0.960
4oey DHTAndrogen receptor / 0.959
2ylp TESAndrogen receptor / 0.944
2q7k TESAndrogen receptor / 0.942
4hlw TESAndrogen receptor / 0.917
2ao6 R18Androgen receptor / 0.887
2yhd TESAndrogen receptor / 0.881
1xow R18Androgen receptor / 0.849
2pnu ENMAndrogen receptor / 0.843
1xj7 DHTAndrogen receptor / 0.825
2q7j TESAndrogen receptor / 0.816
2am9 TESAndrogen receptor / 0.806
1gs4 ZK5Androgen receptor / 0.804
2amb 17HAndrogen receptor / 0.799
2q7l TESAndrogen receptor / 0.795
2pix DHTAndrogen receptor / 0.780
1xq3 R18Androgen receptor / 0.723
4e5l DBHPolymerase acidic protein / 0.691
2piu DHTAndrogen receptor / 0.688
1jtv TESEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.685
1d2s DHTSex hormone-binding globulin / 0.684
1qyw 5SDEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.684
2lba CHOFatty acid binding protein 6 / 0.683
3cmf PDN3-oxo-5-beta-steroid 4-dehydrogenase / 0.679
3uzz ASD3-oxo-5-beta-steroid 4-dehydrogenase / 0.676
1xu7 CPSCorticosteroid 11-beta-dehydrogenase isozyme 1 1.1.1.146 0.675
3w5t LHPVitamin D3 receptor / 0.674
4at2 ASDPossible succinate dehydrogenase / 0.673
3w5p 4OAVitamin D3 receptor / 0.670
1xf0 ASDAldo-keto reductase family 1 member C3 / 0.660
1f5f DHTSex hormone-binding globulin / 0.653
3uzx AOX3-oxo-5-beta-steroid 4-dehydrogenase / 0.652
4q0a 4OAVitamin D3 receptor A / 0.652
1lho AOMSex hormone-binding globulin / 0.650