Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2ym8 YM8 Serine/threonine-protein kinase Chk1 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2ym8 YM8Serine/threonine-protein kinase Chk1 2.7.11.1 0.862
4ft5 H2KSerine/threonine-protein kinase Chk1 2.7.11.1 0.704
4ftc H6KSerine/threonine-protein kinase Chk1 2.7.11.1 0.689
4ft9 H4KSerine/threonine-protein kinase Chk1 2.7.11.1 0.685
1zys 199Serine/threonine-protein kinase Chk1 2.7.11.1 0.679
4fta H5KSerine/threonine-protein kinase Chk1 2.7.11.1 0.670
2e9u A25Serine/threonine-protein kinase Chk1 2.7.11.1 0.669
4ftq 4HKSerine/threonine-protein kinase Chk1 2.7.11.1 0.669
2vrx 447Aurora kinase B-A 2.7.11.1 0.667
2e9v 85ASerine/threonine-protein kinase Chk1 2.7.11.1 0.656
2ym7 YM7Serine/threonine-protein kinase Chk1 2.7.11.1 0.656