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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2ylq TES Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2ylq TESAndrogen receptor / 1.081
2piv DHTAndrogen receptor / 1.018
2q7i TESAndrogen receptor / 1.010
1t7m DHTAndrogen receptor / 1.004
2ylo TESAndrogen receptor / 0.999
4k7a DHTAndrogen receptor / 0.999
1t76 DHTAndrogen receptor / 0.994
2q7k TESAndrogen receptor / 0.986
2q7l TESAndrogen receptor / 0.982
2q7j TESAndrogen receptor / 0.980
2piu DHTAndrogen receptor / 0.979
2pio DHTAndrogen receptor / 0.977
4oey DHTAndrogen receptor / 0.975
2yhd TESAndrogen receptor / 0.972
2pit DHTAndrogen receptor / 0.965
1t7t DHTAndrogen receptor / 0.960
2z4j DHTAndrogen receptor / 0.960
2am9 TESAndrogen receptor / 0.959
4hlw TESAndrogen receptor / 0.956
4ofu DHTAndrogen receptor / 0.945
2qpy DHTAndrogen receptor / 0.936
1t7f DHTAndrogen receptor / 0.916
4oed DHTAndrogen receptor / 0.916
1t63 DHTAndrogen receptor / 0.897
1gs4 ZK5Androgen receptor / 0.852
4ofr DHTAndrogen receptor / 0.841
1xow R18Androgen receptor / 0.831
1t73 DHTAndrogen receptor / 0.798
2pip DHTAndrogen receptor / 0.789
1t7r DHTAndrogen receptor / 0.785
1e3g R18Androgen receptor / 0.782
4oea DHTAndrogen receptor / 0.777
2pkl DHTAndrogen receptor / 0.769
2ylp TESAndrogen receptor / 0.766
1t79 DHTAndrogen receptor / 0.763
1t5z DHTAndrogen receptor / 0.759
4oez DHTAndrogen receptor / 0.756
1t74 DHTAndrogen receptor / 0.738
2ama DHTAndrogen receptor / 0.738
2piw DHTAndrogen receptor / 0.734
2ao6 R18Androgen receptor / 0.727
1t65 DHTAndrogen receptor / 0.723
3zqt TESAndrogen receptor / 0.701
3g1r FIT3-oxo-5-beta-steroid 4-dehydrogenase / 0.685
4at2 ASDPossible succinate dehydrogenase / 0.675
4e5l DBHPolymerase acidic protein / 0.672
1xq3 R18Androgen receptor / 0.669
1e3k R18Progesterone receptor / 0.667
2rlc CHDCholoylglycine hydrolase 3.5.1.24 0.667
2amb 17HAndrogen receptor / 0.666
3uzz ASD3-oxo-5-beta-steroid 4-dehydrogenase / 0.665
1xj7 DHTAndrogen receptor / 0.664
1lhu ESTSex hormone-binding globulin / 0.662
1xf0 ASDAldo-keto reductase family 1 member C3 / 0.657
4apu A2KProgesterone receptor / 0.657
3uzz TES3-oxo-5-beta-steroid 4-dehydrogenase / 0.652
2pix DHTAndrogen receptor / 0.650