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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2yix YIX Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2yix YIXMitogen-activated protein kinase 14 / 1.128
2yiw YIWMitogen-activated protein kinase 14 / 0.800
3nww 3NWMitogen-activated protein kinase 14 / 0.752
2yis YISMitogen-activated protein kinase 14 / 0.750
3rin I2OMitogen-activated protein kinase 14 / 0.710
3zsi 52PMitogen-activated protein kinase 14 / 0.662
3iw7 IPKMitogen-activated protein kinase 14 / 0.657
3p7b P7BMitogen-activated protein kinase 14 / 0.656
3hp2 P36Mitogen-activated protein kinase 14 / 0.652