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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2yi7 BZ8 Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2yi7 BZ8Heat shock protein HSP 90-alpha / 0.873
2yi5 YI5Heat shock protein HSP 90-alpha / 0.833
2yi6 6QMHeat shock protein HSP 90-alpha / 0.812
2yjw YJWHeat shock protein HSP 90-alpha / 0.781
3k97 4CDHeat shock protein HSP 90-alpha / 0.760
2bsm BSMHeat shock protein HSP 90-alpha / 0.749
3eko PYUHeat shock protein HSP 90-alpha / 0.748
2xab VHDHeat shock protein HSP 90-alpha / 0.746
2xjx XJXHeat shock protein HSP 90-alpha / 0.746
1yc1 4BCHeat shock protein HSP 90-alpha / 0.745
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
2xjj L81Heat shock protein HSP 90-alpha / 0.744
1qy8 RDIEndoplasmin / 0.743
2cct 2E1Heat shock protein HSP 90-alpha / 0.735
3k98 1RCHeat shock protein HSP 90-alpha / 0.735
3k99 PFTHeat shock protein HSP 90-alpha / 0.734
2ccu 2D9Heat shock protein HSP 90-alpha / 0.727
1yc4 43PHeat shock protein HSP 90-alpha / 0.726
3hhu 819Heat shock protein HSP 90-alpha / 0.726
3inw JZBHeat shock protein HSP 90-alpha / 0.725
2ye9 2D4Heat shock protein HSP 90-alpha / 0.722
3hek BD0Heat shock protein HSP 90-alpha / 0.721
3ekr PY9Heat shock protein HSP 90-alpha / 0.712
2vcj 2EQHeat shock protein HSP 90-alpha / 0.711
1u0z RDCEndoplasmin / 0.708
4efu EFUHeat shock protein HSP 90-alpha / 0.701
2byi 2DDHeat shock protein HSP 90-alpha / 0.695
2brc CT5ATP-dependent molecular chaperone HSP82 / 0.690
2yk2 YJWHeat shock protein HSP 90-alpha / 0.686
4bqj XKLHeat shock protein HSP 90-alpha / 0.684
2xjg XJGHeat shock protein HSP 90-alpha / 0.682
4egh 0OYHeat shock protein HSP 90-alpha / 0.679
4b7p 9UNHeat shock protein HSP 90-alpha / 0.675
1yc3 4BCHeat shock protein HSP 90-alpha / 0.663
2byh 2D7Heat shock protein HSP 90-alpha / 0.663
2iws NP4ATP-dependent molecular chaperone HSP82 / 0.660
2uwd 2GGHeat shock protein HSP 90-alpha / 0.660
2vci 2GJHeat shock protein HSP 90-alpha / 0.660
2yec XQ0Heat shock protein HSP 90-alpha / 0.660
4ce2 BO5ATP-dependent molecular chaperone HSP82 / 0.660
4mp7 PFT[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial 2.7.11.2 0.659
2fyp RDEEndoplasmin / 0.658
4egk RDCHeat shock protein HSP 90-alpha / 0.653