sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2xve | FAD | Putative flavin-containing monooxygenase |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 2xve | FAD | Putative flavin-containing monooxygenase | / | 1.448 | |
| 2xvf | FAD | Putative flavin-containing monooxygenase | / | 1.266 | |
| 2xlp | FAD | Putative flavin-containing monooxygenase | / | 1.242 | |
| 2vq7 | FAD | Putative flavin-containing monooxygenase | / | 1.235 | |
| 2xvh | FAD | Putative flavin-containing monooxygenase | / | 1.222 | |
| 2xls | FAD | Putative flavin-containing monooxygenase | / | 1.202 | |
| 2xlr | FAD | Putative flavin-containing monooxygenase | / | 1.193 | |
| 2xvi | FAD | Putative flavin-containing monooxygenase | / | 1.183 | |
| 2vqb | FAD | Putative flavin-containing monooxygenase | / | 1.152 | |
| 2jb1 | FAD | L-amino acid oxidase | / | 0.850 | |
| 2gv8 | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.840 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.837 | |
| 3uoy | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.827 | |
| 2gvc | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.821 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.821 | |
| 2yg3 | FAD | Putrescine oxidase | / | 0.821 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.807 | |
| 4b69 | FAD | L-ornithine N(5)-monooxygenase | / | 0.803 | |
| 2yg5 | FAD | Putrescine oxidase | / | 0.794 | |
| 2bab | FAD | Putative aminooxidase | / | 0.783 | |
| 3rha | FDA | Putrescine oxidase | / | 0.783 | |
| 4tm3 | FAD | KtzI | / | 0.783 | |
| 3ab1 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.782 | |
| 4b65 | FAD | L-ornithine N(5)-monooxygenase | / | 0.777 | |
| 2eq8 | FAD | Dihydrolipoyl dehydrogenase | / | 0.776 | |
| 3lzw | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.776 | |
| 2ylt | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.773 | |
| 4gcm | FAD | Thioredoxin reductase | 1.8.1.9 | 0.772 | |
| 2eq6 | FAD | Dihydrolipoyl dehydrogenase | / | 0.770 | |
| 3up5 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.769 | |
| 2yg4 | FAD | Putrescine oxidase | / | 0.768 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 0.768 | |
| 3uox | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.766 | |
| 4mo2 | FAD | UDP-galactopyranose mutase | / | 0.764 | |
| 4b68 | FAD | L-ornithine N(5)-monooxygenase | / | 0.762 | |
| 1zmd | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.759 | |
| 3lzx | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.758 | |
| 2iw5 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.757 | |
| 4dsg | FAD | Uncharacterized protein | / | 0.756 | |
| 2yg7 | FAD | Putrescine oxidase | / | 0.755 | |
| 3r9u | FAD | Thioredoxin reductase | / | 0.755 | |
| 3gwd | FAD | Cyclohexanone monooxygenase | / | 0.754 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.753 | |
| 4j36 | FAD | Kynurenine 3-monooxygenase | / | 0.753 | |
| 2qa1 | FAD | PgaE | / | 0.750 | |
| 4udr | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.748 | |
| 1h83 | FAD | Polyamine oxidase | 1.5.3.14 | 0.747 | |
| 2zbw | FAD | Ferredoxin--NADP reductase | / | 0.746 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 0.746 | |
| 3kve | FAD | L-amino-acid oxidase | / | 0.744 | |
| 1tdf | FAD | Thioredoxin reductase | 1.8.1.9 | 0.743 | |
| 2bac | FAD | Putative aminooxidase | / | 0.743 | |
| 4nzh | FAD | L-ornithine N(5)-monooxygenase | / | 0.743 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.742 | |
| 2c3c | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.741 | |
| 4cnj | FAD | L-amino acid oxidase | / | 0.741 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.740 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.740 | |
| 3kkj | FAD | Renalase | / | 0.740 | |
| 3t37 | FAD | Pyridoxine 4-oxidase | / | 0.740 | |
| 4tlz | FAD | KtzI | / | 0.740 | |
| 1trb | FAD | Thioredoxin reductase | 1.8.1.9 | 0.739 | |
| 3oz2 | FAD | Digeranylgeranylglycerophospholipid reductase | / | 0.739 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 0.739 | |
| 3ute | FAD | UDP-galactopyranose mutase | / | 0.735 | |
| 2iid | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.734 | |
| 2q0l | FAD | Thioredoxin reductase | 1.8.1.9 | 0.732 | |
| 3icr | FAD | Coenzyme A disulfide reductase | / | 0.732 | |
| 1f8r | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.731 | |
| 4b66 | FAD | L-ornithine N(5)-monooxygenase | / | 0.731 | |
| 2uxx | FAJ | Lysine-specific histone demethylase 1A | 1 | 0.730 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.730 | |
| 3uoz | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.730 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 0.729 | |
| 4tlx | FDA | KtzI | / | 0.729 | |
| 1cjc | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.728 | |
| 1mxt | FAE | Cholesterol oxidase | 1.1.3.6 | 0.728 | |
| 4mo2 | FDA | UDP-galactopyranose mutase | / | 0.728 | |
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.727 | |
| 4guu | FA9 | Lysine-specific histone demethylase 1B | 1 | 0.727 | |
| 3f8p | NAD | NADH oxidase/thioredoxin reductase | / | 0.726 | |
| 3zdn | FAD | Monoamine oxidase N | 1.4.3.4 | 0.726 | |
| 4jq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.726 | |
| 4o5q | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.726 | |
| 2bi7 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.725 | |
| 4ntd | FAD | Thioredoxin reductase | / | 0.725 | |
| 1e1k | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.724 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.724 | |
| 4u8n | FDA | UDP-galactopyranose mutase | / | 0.724 | |
| 1d7l | RFL | p-hydroxybenzoate hydroxylase | / | 0.723 | |
| 1tde | FAD | Thioredoxin reductase | 1.8.1.9 | 0.723 | |
| 1yqz | FAD | Coenzyme A disulfide reductase | / | 0.723 | |
| 2b9w | FAD | Putative aminooxidase | / | 0.723 | |
| 3kyb | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.723 | |
| 4a99 | FAD | TetX family tetracycline inactivation enzyme | / | 0.723 | |
| 4hsu | FAD | Lysine-specific histone demethylase 1B | 1 | 0.723 | |
| 1pdh | FAS | p-hydroxybenzoate hydroxylase | / | 0.722 | |
| 4k2x | FAD | Polyketide oxygenase/hydroxylase | / | 0.722 | |
| 3gwf | FAD | Cyclohexanone monooxygenase | / | 0.721 | |
| 1w4x | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.720 | |
| 3up4 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.720 | |
| 4em4 | FAD | Coenzyme A disulfide reductase | / | 0.720 | |
| 5g3s | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.720 | |
| 4b63 | FAD | L-ornithine N(5)-monooxygenase | / | 0.718 | |
| 4tm0 | FAD | KtzI | / | 0.718 | |
| 3vqr | FAD | Putative oxidoreductase | / | 0.717 | |
| 4emw | FAD | Coenzyme A disulfide reductase | / | 0.715 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.715 | |
| 4jdr | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.715 | |
| 1nhs | FAD | NADH peroxidase | 1.11.1.1 | 0.714 | |
| 3rnm | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.714 | |
| 4b64 | FAD | L-ornithine N(5)-monooxygenase | / | 0.714 | |
| 4x4j | FAD | Putative oxygenase | / | 0.714 | |
| 2npx | FAD | NADH peroxidase | 1.11.1.1 | 0.712 | |
| 1nhp | FAD | NADH peroxidase | 1.11.1.1 | 0.711 | |
| 4u8l | FDA | UDP-galactopyranose mutase | / | 0.711 | |
| 2eq7 | FAD | Dihydrolipoyl dehydrogenase | / | 0.710 | |
| 3ukl | FAD | UDP-galactopyranose mutase | / | 0.710 | |
| 1rp0 | AHZ | Thiamine thiazole synthase, chloroplastic | / | 0.709 | |
| 4gur | FAD | Lysine-specific histone demethylase 1B | 1 | 0.708 | |
| 2igo | FAD | Pyranose 2-oxidase | / | 0.707 | |
| 2q0k | FAD | Thioredoxin reductase | 1.8.1.9 | 0.707 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.706 | |
| 3f8d | FAD | NADH oxidase/thioredoxin reductase | / | 0.706 | |
| 4rek | FAD | Cholesterol oxidase | 1.1.3.6 | 0.706 | |
| 3t14 | FAD | Sulfide-quinone reductase | / | 0.705 | |
| 4fwj | FAD | Lysine-specific histone demethylase 1B | 1 | 0.705 | |
| 4k5r | FAD | Oxygenase | / | 0.705 | |
| 3kpk | FAD | Sulfide-quinone reductase | / | 0.704 | |
| 3t2z | FAD | Sulfide-quinone reductase | / | 0.704 | |
| 4tm1 | FDA | KtzI | / | 0.704 | |
| 4u2t | FAD | Cholesterol oxidase | 1.1.3.6 | 0.704 | |
| 1n4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.703 | |
| 3cnj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.703 | |
| 3djg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.703 | |
| 3uov | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.703 | |
| 4eqs | FAD | Coenzyme A disulfide reductase | / | 0.703 | |
| 4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 0.703 | |
| 1k0l | FAD | p-hydroxybenzoate hydroxylase | / | 0.702 | |
| 3gyi | FAD | Cholesterol oxidase | 1.1.3.6 | 0.702 | |
| 3gyj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.702 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 0.702 | |
| 5g3t | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.701 | |
| 1cc2 | FAD | Cholesterol oxidase | 1.1.3.6 | 0.700 | |
| 1fl2 | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.698 | |
| 3fpz | AHZ | Thiamine thiazole synthase | / | 0.698 | |
| 3int | FDA | UDP-galactopyranose mutase | 5.4.99.9 | 0.698 | |
| 5dbj | FAD | FADH2-dependent halogenase PltA | / | 0.697 | |
| 2ywl | FAD | Thioredoxin reductase related protein | / | 0.695 | |
| 3nta | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.695 | |
| 3s5w | FAD | L-ornithine N(5)-monooxygenase | / | 0.695 | |
| 4gus | FAD | Lysine-specific histone demethylase 1B | 1 | 0.695 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 0.695 | |
| 1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.694 | |
| 1ijh | FAD | Cholesterol oxidase | 1.1.3.6 | 0.694 | |
| 3lsm | SFD | Pyranose 2-oxidase | / | 0.694 | |
| 4nte | FAD | DepH | / | 0.694 | |
| 5hhf | FDA | UDP-galactopyranose mutase | / | 0.694 | |
| 5j60 | FAD | Thioredoxin reductase | / | 0.694 | |
| 1dnc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.693 | |
| 2c7g | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.693 | |
| 1e1m | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.692 | |
| 1grh | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.692 | |
| 1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.692 | |
| 4em3 | FAD | Coenzyme A disulfide reductase | / | 0.692 | |
| 1n4u | FAE | Cholesterol oxidase | 1.1.3.6 | 0.691 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.691 | |
| 1d4c | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.690 | |
| 1nhq | FAD | NADH peroxidase | 1.11.1.1 | 0.690 | |
| 2yvj | FAD | Ferredoxin reductase | / | 0.690 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 0.690 | |
| 2bi8 | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.689 | |
| 2vou | FAD | 2,6-dihydroxypyridine 3-monooxygenase | 1.14.13.10 | 0.689 | |
| 4z24 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.689 | |
| 2r9z | FAD | Glutathione amide reductase | / | 0.688 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.687 | |
| 3klj | FAD | NADH-rubredoxin oxidoreductase | 1.18.1.1 | 0.687 | |
| 3qvr | FAD | Glucose oxidase | 1.1.3.4 | 0.687 | |
| 1i8t | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.686 | |
| 2hqm | FAD | Glutathione reductase | 1.8.1.7 | 0.686 | |
| 3nlc | FAD | Uncharacterized protein | / | 0.686 | |
| 1b8s | FAD | Cholesterol oxidase | 1.1.3.6 | 0.685 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.685 | |
| 1y56 | ATP | Uncharacterized protein | / | 0.685 | |
| 2r0c | FAD | Putative FAD-monooxygenase | / | 0.685 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.684 | |
| 3t2y | FAD | Sulfide-quinone reductase | / | 0.684 | |
| 1e1l | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.683 | |
| 1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.683 | |
| 1n4w | FAD | Cholesterol oxidase | 1.1.3.6 | 0.683 | |
| 2vvl | FAD | Monoamine oxidase N | 1.4.3.4 | 0.683 | |
| 3cnt | FAD | Polyamine oxidase FMS1 | / | 0.683 | |
| 4eqr | FAD | Coenzyme A disulfide reductase | / | 0.683 | |
| 4icy | FAD | PgaE | / | 0.683 | |
| 4xxg | FAD | Cholesterol oxidase | 1.1.3.6 | 0.683 | |
| 2ard | FDA | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.682 | |
| 5cku | FAD | L-ornithine N(5)-monooxygenase | / | 0.682 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.682 | |
| 1n1p | FAD | Cholesterol oxidase | 1.1.3.6 | 0.681 | |
| 1wam | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.681 | |
| 2gsd | NAD | Formate dehydrogenase | / | 0.681 | |
| 3rp8 | FAD | FAD-dependent urate hydroxylase | / | 0.681 | |
| 4j34 | FAD | Kynurenine 3-monooxygenase | / | 0.681 | |
| 5er0 | FAD | Uncharacterized NAD(FAD)-dependent dehydrogenase | / | 0.681 | |
| 1cbo | FAD | Cholesterol oxidase | 1.1.3.6 | 0.680 | |
| 2h94 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.680 | |
| 3sz0 | FAD | Sulfide-quinone reductase | / | 0.680 | |
| 1e1n | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.679 | |
| 3ics | FAD | Coenzyme A disulfide reductase | / | 0.679 | |
| 3k7t | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.679 | |
| 3qj4 | FAD | Renalase | / | 0.679 | |
| 1cf3 | FAD | Glucose oxidase | 1.1.3.4 | 0.678 | |
| 2dki | FAD | 3-hydroxybenzoate 4-monooxygenase | 1.14.13.23 | 0.678 | |
| 2whd | FAD | Thioredoxin reductase | / | 0.678 | |
| 2xdo | FAD | TetX family tetracycline inactivation enzyme | / | 0.678 | |
| 4mih | FAD | Pyranose 2-oxidase | 1.1.3.10 | 0.678 | |
| 3nt6 | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.677 | |
| 1nhr | FAD | NADH peroxidase | 1.11.1.1 | 0.676 | |
| 2qa2 | FAD | Polyketide oxygenase CabE | / | 0.676 | |
| 4cnk | FAD | L-amino acid oxidase | / | 0.676 | |
| 4z26 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.676 | |
| 3l8k | ADP | Dihydrolipoamide dehydrogenase (PdhD-3) | / | 0.675 | |
| 4bk2 | FAD | Probable salicylate monooxygenase | / | 0.675 | |
| 4u8k | FDA | UDP-galactopyranose mutase | / | 0.675 | |
| 1ebd | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.674 | |
| 1p1h | NAD | Inositol-3-phosphate synthase | 5.5.1.4 | 0.674 | |
| 1zmc | NAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.674 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.674 | |
| 4ech | FAD | Polyamine oxidase FMS1 | / | 0.674 | |
| 4qi7 | FAD | Cellobiose dehydrogenase | / | 0.674 | |
| 3ept | FDA | Putative FAD-monooxygenase | / | 0.673 | |
| 3pl8 | FAD | Pyranose 2-oxidase | / | 0.673 | |
| 4u2s | FDA | Cholesterol oxidase | 1.1.3.6 | 0.673 | |
| 2gew | FAD | Cholesterol oxidase | 1.1.3.6 | 0.672 | |
| 3bg7 | FAD | Pyranose 2-oxidase | / | 0.672 | |
| 3utg | FDA | UDP-galactopyranose mutase | / | 0.672 | |
| 4u8j | FDA | UDP-galactopyranose mutase | / | 0.672 | |
| 1bwc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.671 | |
| 2cvj | FAD | Thioredoxin reductase related protein | / | 0.671 | |
| 2yg6 | FAD | Putrescine oxidase | / | 0.671 | |
| 2ylr | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.671 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.670 | |
| 1kif | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.670 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 0.670 | |
| 2fjb | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.670 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.670 | |
| 2fjd | SFD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.669 | |
| 4tm4 | FDA | KtzI | / | 0.669 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.669 | |
| 1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.668 | |
| 1v59 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.668 | |
| 3lsi | FAD | Pyranose 2-oxidase | / | 0.668 | |
| 1f8w | FAD | NADH peroxidase | 1.11.1.1 | 0.667 | |
| 4hb9 | FAD | Uncharacterized protein | / | 0.667 | |
| 4usr | FAD | Monooxygenase | / | 0.667 | |
| 1o94 | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.665 | |
| 2ylx | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.664 | |
| 3k30 | ADP | Histamine dehydrogenase | / | 0.664 | |
| 3lov | FAD | Protoporphyrinogen oxidase | / | 0.664 | |
| 3m0o | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.664 | |
| 3ukk | FAD | UDP-galactopyranose mutase | / | 0.664 | |
| 3urh | FAD | Dihydrolipoyl dehydrogenase | / | 0.664 | |
| 1knp | FAD | L-aspartate oxidase | 1.4.3.16 | 0.663 | |
| 4mok | FAD | Pyranose 2-oxidase | / | 0.663 | |
| 1ojt | FAD | Dihydrolipoyl dehydrogenase | / | 0.662 | |
| 2bry | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.662 | |
| 2tmd | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.662 | |
| 3ad9 | NAD | Subunit alpha of sarocosine oxidase | / | 0.662 | |
| 3pgx | NAD | Uncharacterized NAD-dependent oxidoreductase MAP_4146 | / | 0.662 | |
| 3uth | FDA | UDP-galactopyranose mutase | / | 0.662 | |
| 5fa5 | MTA | Protein arginine N-methyltransferase 5 | / | 0.662 | |
| 5j3w | FMN | Sensory box protein | / | 0.662 | |
| 5j4e | FMN | Sensory box protein | / | 0.662 | |
| 3k4c | FAD | Pyranose 2-oxidase | / | 0.661 | |
| 4j33 | FAD | Kynurenine 3-monooxygenase | / | 0.661 | |
| 1k0j | FAD | p-hydroxybenzoate hydroxylase | / | 0.660 | |
| 4jn9 | FAD | DepH | / | 0.660 | |
| 1zx9 | FAD | Mercuric reductase | 1.16.1.1 | 0.659 | |
| 2fja | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.659 | |
| 2gqw | FAD | Ferredoxin reductase | / | 0.659 | |
| 4wx1 | FDA | UDP-galactopyranose mutase | / | 0.659 | |
| 5hsa | FAS | Alcohol oxidase 1 | 1.1.3.13 | 0.659 | |
| 1djn | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.658 | |
| 3ean | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.658 | |
| 3hdy | FAD | UDP-galactopyranose mutase | / | 0.658 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 0.658 | |
| 1npx | FAD | NADH peroxidase | 1.11.1.1 | 0.657 | |
| 1sez | FAD | Protoporphyrinogen oxidase, mitochondrial | 1.3.3.4 | 0.657 | |
| 4eer | FMN | Phototropin-2 | 2.7.11.1 | 0.657 | |
| 1h81 | FAD | Polyamine oxidase | 1.5.3.14 | 0.656 | |
| 2qae | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.656 | |
| 2ylz | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.656 | |
| 3djj | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.656 | |
| 4c5o | FAD | Putative monooxygenase | / | 0.656 | |
| 2ign | FAD | Pyranose 2-oxidase | / | 0.655 | |
| 2x3n | FAD | Probable FAD-dependent monooxygenase | / | 0.655 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.655 | |
| 4cbq | FAD | Thioredoxin reductase | / | 0.655 | |
| 4h4x | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.655 | |
| 4opd | FDA | Conserved Archaeal protein | / | 0.655 | |
| 1gal | FAD | Glucose oxidase | 1.1.3.4 | 0.654 | |
| 1gpe | FAD | Glucose oxidase | 1.1.3.4 | 0.654 | |
| 1mo9 | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.654 | |
| 1v0j | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.654 | |
| 1fec | FAD | Trypanothione reductase | 1.8.1.12 | 0.653 | |
| 1grb | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.653 | |
| 2gh5 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.653 | |
| 3cn8 | FAD | Polyamine oxidase FMS1 | / | 0.653 | |
| 1djq | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.652 | |
| 1tdk | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.652 | |
| 2fje | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.652 | |
| 3nn6 | FB0 | 6-hydroxy-L-nicotine oxidase | / | 0.652 | |
| 4bv6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.652 | |
| 4d03 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.652 | |
| 4x9m | FAD | Uncharacterized protein MG039 homolog | / | 0.652 | |
| 1gre | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.651 | |
| 1tdo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.651 | |
| 4h4z | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.651 | |
| 4up3 | FAD | Thioredoxin reductase | / | 0.651 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.650 | |
| 1jnz | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.650 | |
| 2tpr | FAD | Trypanothione reductase | 1.8.1.12 | 0.650 | |
| 4at0 | FAD | Possible succinate dehydrogenase | / | 0.650 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.650 |