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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2x7b COA N-alpha-acetyltransferase 2.3.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2x7b COAN-alpha-acetyltransferase 2.3.1 1.402
4lx9 ACON-alpha-acetyltransferase 2.3.1 1.138
4r3k COAN-alpha-acetyltransferase 2.3.1 1.107
4kvx ACON-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 1.002
4kub COAUncharacterized protein / 0.892
3pgp ACOUncharacterized protein / 0.866
2cns ACORibosomal-protein-alanine acetyltransferase / 0.853
2cnt COARibosomal-protein-alanine acetyltransferase / 0.851
2r8v ACOAmino-acid acetyltransferase / 0.842
4jwp ACOGCN5-related N-acetyltransferase / 0.840
2psw COAN-alpha-acetyltransferase 50 / 0.836
1wwz ACOUncharacterized protein / 0.809
5c88 COAN-alpha-acetyltransferase / 0.805
1p0h COAMycothiol acetyltransferase 2.3.1.189 0.798
1kuv CA5Serotonin N-acetyltransferase / 0.786
1l0c COTSerotonin N-acetyltransferase / 0.781
1ozp ACOMycothiol acetyltransferase 2.3.1.189 0.778
2ou2 ACOHistone acetyltransferase KAT5 / 0.777
2bsw CAOProbable acetyltransferase / 0.774
2jdc CAOProbable acetyltransferase / 0.774
5kf8 ACOPredicted acetyltransferase / 0.773
1pu9 COAHAT A1 / 0.772
2jdd ACOProbable acetyltransferase / 0.772
5kf9 ACOPredicted acetyltransferase / 0.772
3r1k COAN-acetyltransferase Eis / 0.771
3te4 ACODopamine N-acetyltransferase / 0.771
5kf2 ACOPredicted acetyltransferase / 0.768
1ghe ACOAcetyltransferase 2.3.1 0.767
1qsm ACOHistone acetyltransferase HPA2 / 0.767
4qvt ACOAcetyltransferase YpeA 2.3.1 0.762
1cjw COTSerotonin N-acetyltransferase / 0.756
1j4j ACOAcetyltransferase 2.3.1 0.751
1kux CA3Serotonin N-acetyltransferase / 0.750
5kgj ACOPredicted acetyltransferase / 0.750
1pua COAHAT A1 / 0.746
3dr8 ACOL-methionine sulfoximine/L-methionine sulfone acetyltransferase / 0.745
2bei ACODiamine acetyltransferase 2 2.3.1.57 0.742
3sxn COAN-acetyltransferase Eis / 0.739
2c27 ACOMycothiol acetyltransferase 2.3.1.189 0.736
3exn ACOProbable acetyltransferase / 0.735
2b58 COADiamine acetyltransferase 1 / 0.734
4hkf ACOAlpha-tubulin N-acetyltransferase 1 / 0.734
3vwe COAAlpha-tubulin N-acetyltransferase 1 / 0.733
1bob ACOHistone acetyltransferase type B catalytic subunit / 0.732
1ib1 COTSerotonin N-acetyltransferase / 0.731
2fiw ACOGCN5-related N-acetyltransferase:Aminotransferase, class-II / 0.731
2ozu ACOHistone acetyltransferase KAT6A / 0.727
2rc4 ACOHistone acetyltransferase KAT6A / 0.727
2y0m ACOHistone acetyltransferase KAT8 / 0.725
5h86 BCOHistone acetyltransferase KAT2A 2.3.1.48 0.723
1mj9 COAHistone acetyltransferase ESA1 / 0.717
5h84 1VUHistone acetyltransferase KAT2A 2.3.1.48 0.716
1mjb ACOHistone acetyltransferase ESA1 / 0.715
1kuy COTSerotonin N-acetyltransferase / 0.714
3to6 LYS_CMCHistone acetyltransferase ESA1 / 0.714
5kgp ACOPredicted acetyltransferase / 0.710
3mgd ACOPredicted acetyltransferase / 0.708
2q4v ACODiamine acetyltransferase 2 2.3.1.57 0.707
5kf1 ACOPredicted acetyltransferase / 0.707
3r96 ACOMccE protein / 0.705
1qsn COAHAT A1 / 0.703
4u9z COAAlpha-tubulin N-acetyltransferase 1 / 0.703
1qsr ACOHAT A1 / 0.701
4ag7 COAGlucosamine 6-phosphate N-acetyltransferase / 0.701
4u9y COAAlpha-tubulin N-acetyltransferase 1 / 0.699
1z4r ACOHistone acetyltransferase KAT2A 2.3.1.48 0.698
4u9v ACON-alpha-acetyltransferase 40 2.3.1 0.695
1cm0 COAHistone acetyltransferase KAT2B 2.3.1.48 0.694
1s7n COAAcetyl transferase / 0.691
4zm6 ACON-acetyl-beta-D glucosaminidase / 0.690
2zpa ACOtRNA(Met) cytidine acetyltransferase TmcA / 0.688
2zw5 COABleomycin acetyltransferase / 0.687
1n71 COAAac(6')-Ii protein / 0.686
1i12 ACOGlucosamine 6-phosphate N-acetyltransferase / 0.683
2a4n COAAac(6')-Ii protein / 0.683
1b87 ACOAac(6')-Ii protein / 0.682
3cz7 ACOHistone acetyltransferase RTT109 2.3.1.48 0.677
2vez ACOGlucosamine 6-phosphate acetyltransferase, putative / 0.676
2ob0 ACON-alpha-acetyltransferase 50 / 0.675
1s3z COAAminoglycoside N(6')-acetyltransferase type 1 / 0.673
4b5o ACOAlpha-tubulin N-acetyltransferase 1 / 0.673
4h6u ACOAlpha-tubulin N-acetyltransferase 1 / 0.672
4if5 ACOAlpha-tubulin N-acetyltransferase 1 / 0.672
4xnh ACON-terminal acetyltransferase A complex subunit NAT5 2.3.1 0.672
1m1d LYXHAT A1 / 0.670
2zw4 COABleomycin acetyltransferase / 0.668
5a28 MYAGlycylpeptide N-tetradecanoyltransferase / 0.665
1fy7 COAHistone acetyltransferase ESA1 / 0.659
1tiq COASpermidine/spermine N(1)-acetyltransferase / 0.659
2prb COAAminoglycoside 6-N-acetyltransferase type Ib11 / 0.659
2b3v ACODiamine acetyltransferase 1 / 0.658
2giv ACOHistone acetyltransferase KAT8 / 0.656
2vzz SCAPutative succinyl-CoA transferase Rv0802c 2.8.3 0.655
3f8k COAUncharacterized protein / 0.654
2vqy ACOAAC(6')-Ib / 0.653
3d2m COAAmino-acid acetyltransferase / 0.653
3vwd ACOAlpha-tubulin N-acetyltransferase 1 / 0.653
2vxk COAGlucosamine 6-phosphate acetyltransferase, putative / 0.652
2bue COAAAC(6')-Ib / 0.650
3s6f COAUncharacterized protein / 0.650
3tfy COAN-alpha-acetyltransferase 50 2.3.1 0.650