Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2wle | COA | Polysialic acid O-acetyltransferase |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
2wle | COA | Polysialic acid O-acetyltransferase | / | 1.326 | |
2wlg | SOP | Polysialic acid O-acetyltransferase | / | 1.039 | |
2wlf | ACO | Polysialic acid O-acetyltransferase | / | 0.810 | |
1zcb | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.679 | |
4hur | ACO | Virginiamycin A acetyltransferase | 2.3.1 | 0.659 | |
4pjj | ADP | Unconventional myosin-VI | / | 0.653 | |
4cf7 | ADP | Adenylate kinase | / | 0.652 |