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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2weo FBW Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.837
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.799
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.792
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.790
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.780
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.779
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.769
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.768
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.763
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.763
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.761
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.759
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.756
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.755
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.749
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.747
3mzc S6ICarbonic anhydrase 2 4.2.1.1 0.746
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.745
3oys OYSCarbonic anhydrase 2 4.2.1.1 0.745
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4ilx 1EZCarbonic anhydrase 2 4.2.1.1 0.744
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.743
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.740
3mho J43Carbonic anhydrase 2 4.2.1.1 0.735
1okm SABCarbonic anhydrase 2 4.2.1.1 0.734
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.734
3eft 3BSCarbonic anhydrase 2 4.2.1.1 0.731
4uov AZMCarbonate dehydratase / 0.730
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.726
3daz MZMCarbonic anhydrase 2 4.2.1.1 0.726
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.726
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.725
4xiw AZMCarbonic anhydrase, alpha type / 0.725
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.724
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.724
4ht2 V50Carbonic anhydrase 12 4.2.1.1 0.724
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.723
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.723
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.723
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.723
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.721
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.721
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.720
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.718
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.718
3hku TORCarbonic anhydrase 2 4.2.1.1 0.718
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.716
3s9t E49Carbonic anhydrase 2 4.2.1.1 0.713
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.713
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.710
1okn STBCarbonic anhydrase 2 4.2.1.1 0.710
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.710
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.705
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.705
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.705
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.705
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.704
1cnx EG2Carbonic anhydrase 2 4.2.1.1 0.703
3po6 DT9Carbonic anhydrase 2 4.2.1.1 0.703
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.702
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.700
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.700
2pow I7CCarbonic anhydrase 2 4.2.1.1 0.698
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.697
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.696
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.695
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.695
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.693
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.693
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.692
1eou SMSCarbonic anhydrase 2 4.2.1.1 0.690
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.689
2h15 B19Carbonic anhydrase 2 4.2.1.1 0.689
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.689
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.689
4k0t D9ZCarbonic anhydrase 2 4.2.1.1 0.688
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.687
2eu3 FF3Carbonic anhydrase 2 4.2.1.1 0.682
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.682
2nn7 M29Carbonic anhydrase 1 4.2.1.1 0.680
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.680
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.675
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.675
4hu1 V13Carbonic anhydrase 13 4.2.1.1 0.674
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.672
4kap 1QVCarbonic anhydrase 2 4.2.1.1 0.672
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.669
3m96 E38Carbonic anhydrase 2 4.2.1.1 0.667
3m98 E02Carbonic anhydrase 2 4.2.1.1 0.665
5fl4 9FKCarbonic anhydrase 9 4.2.1.1 0.662
1yda AZMCarbonic anhydrase 2 4.2.1.1 0.660
4m2v BZ1Carbonic anhydrase 2 4.2.1.1 0.659
1xq0 4TRCarbonic anhydrase 2 4.2.1.1 0.658
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.658
3myq E27Carbonic anhydrase 2 4.2.1.1 0.656
2weh FB1Carbonic anhydrase 2 4.2.1.1 0.653
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.650
3f7b AG5Carbonic anhydrase 4 4.2.1.1 0.650