Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2vt4 | P32 | Beta-1 adrenergic receptor |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
2vt4 | P32 | Beta-1 adrenergic receptor | / | 1.131 | |
4bvn | P32 | Beta-1 adrenergic receptor | / | 1.042 | |
2ycy | P32 | Beta-1 adrenergic receptor | / | 0.958 | |
5a8e | XTK | Beta-1 adrenergic receptor | / | 0.956 | |
5d6l | CAU | Beta-2 adrenergic receptor | / | 0.952 | |
5jqh | CAU | Beta-2 adrenergic receptor | / | 0.941 | |
2ycz | I32 | Beta-1 adrenergic receptor | / | 0.937 | |
3ny9 | JSZ | Beta-2 adrenergic receptor | / | 0.904 | |
3nya | JTZ | Beta-2 adrenergic receptor | / | 0.903 | |
5d5a | CAU | Beta-2 adrenergic receptor | / | 0.899 | |
2ycw | CAU | Beta-1 adrenergic receptor | / | 0.869 | |
4amj | CVD | Beta-1 adrenergic receptor | / | 0.846 | |
5d5b | CAU | Beta-2 adrenergic receptor | / | 0.832 | |
4ami | G90 | Beta-1 adrenergic receptor | / | 0.819 | |
3d4s | TIM | Beta-2 adrenergic receptor | / | 0.815 | |
4ldl | XQC | Beta-2 adrenergic receptor | / | 0.802 | |
2ycx | P32 | Beta-1 adrenergic receptor | / | 0.800 | |
4gbr | CAU | Beta-2 adrenergic receptor | / | 0.800 | |
5f8u | P32 | Beta-1 adrenergic receptor | / | 0.794 | |
4lde | P0G | Beta-2 adrenergic receptor | / | 0.783 | |
2rh1 | CAU | Beta-2 adrenergic receptor | / | 0.782 | |
2y03 | 5FW | Beta-1 adrenergic receptor | / | 0.749 | |
3p0g | P0G | Beta-2 adrenergic receptor | / | 0.735 | |
2y02 | WHJ | Beta-1 adrenergic receptor | / | 0.734 | |
3ny8 | JRZ | Beta-2 adrenergic receptor | / | 0.726 | |
2y04 | 68H | Beta-1 adrenergic receptor | / | 0.678 |