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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2rg5 279 Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2rg5 279Mitogen-activated protein kinase 14 / 1.046
2rg6 287Mitogen-activated protein kinase 14 / 0.832
4aa5 NQBMitogen-activated protein kinase 14 / 0.798
4kin 1M8Mitogen-activated protein kinase 14 / 0.782
3mvm 39PMitogen-activated protein kinase 14 / 0.763
3fkl FKLMitogen-activated protein kinase 14 / 0.746
3s4q NK0Mitogen-activated protein kinase 14 / 0.718
3rin I2OMitogen-activated protein kinase 14 / 0.711
3iph G11Mitogen-activated protein kinase 14 / 0.708
3dt1 P40Mitogen-activated protein kinase 14 / 0.704
3e92 G6AMitogen-activated protein kinase 14 / 0.693
4aac AAVMitogen-activated protein kinase 14 / 0.690
3kq7 KQ7Mitogen-activated protein kinase 14 / 0.688
4kiq 1RAMitogen-activated protein kinase 14 / 0.688
2zb1 GK4Mitogen-activated protein kinase 14 / 0.679
4ckr DI1Epithelial discoidin domain-containing receptor 1 2.7.10.1 0.678
4i5h G17Mitogen-activated protein kinase 1 2.7.11.24 0.672
3u8w 09JMitogen-activated protein kinase 14 / 0.667
4kip 1R9Mitogen-activated protein kinase 14 / 0.667
4aa0 AA0Mitogen-activated protein kinase 14 / 0.661
3gfe P37Mitogen-activated protein kinase 14 / 0.660
3ocg OCGMitogen-activated protein kinase 14 / 0.655
3o8u BMUMitogen-activated protein kinase 14 / 0.652
2p4i MR9Angiopoietin-1 receptor 2.7.10.1 0.651