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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2rc6 NAP Ferredoxin--NADP reductase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2rc6 NAPFerredoxin--NADP reductase / 1.008
3qfs NAPNADPH--cytochrome P450 reductase / 0.732
3qft NAPNADPH--cytochrome P450 reductase / 0.730
4yau 2AMNADPH--cytochrome P450 reductase / 0.722
1f20 NAPNitric oxide synthase, brain 1.14.13.39 0.718
1fnd A2PFerredoxin--NADP reductase, chloroplastic 1.18.1.2 0.709
4yaw 2AMNADPH--cytochrome P450 reductase / 0.700
4yal 2AMNADPH--cytochrome P450 reductase / 0.699
4yaf 2AMNADPH--cytochrome P450 reductase / 0.696
3zc3 NAPFerredoxin--NADP reductase 1.18.1.2 0.693
1tll NAPNitric oxide synthase, brain 1.14.13.39 0.678
1ja1 NAPNADPH--cytochrome P450 reductase / 0.676
1gjr NAPFerredoxin--NADP reductase 1.18.1.2 0.665
3qfr NAPNADPH--cytochrome P450 reductase / 0.664
3qfc NAPNADPH--cytochrome P450 reductase / 0.659
4fm5 DF0Prostaglandin G/H synthase 2 1.14.99.1 0.653
1amo NAPNADPH--cytochrome P450 reductase / 0.650