Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2r3q 5SC Cyclin-dependent kinase 2 2.7.11.22

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2r3q 5SCCyclin-dependent kinase 2 2.7.11.22 0.960
2r3i SCFCyclin-dependent kinase 2 2.7.11.22 0.780
2r3p 3SCCyclin-dependent kinase 2 2.7.11.22 0.752
2r3f SC8Cyclin-dependent kinase 2 2.7.11.22 0.736
2r3l SCWCyclin-dependent kinase 2 2.7.11.22 0.730
3pj8 404Cyclin-dependent kinase 2 2.7.11.22 0.717
2r3m SCXCyclin-dependent kinase 2 2.7.11.22 0.715
2b54 D05Cyclin-dependent kinase 2 2.7.11.22 0.709
2c68 CT6Cyclin-dependent kinase 2 2.7.11.22 0.708
2r3k SCQCyclin-dependent kinase 2 2.7.11.22 0.708
2c69 CT8Cyclin-dependent kinase 2 2.7.11.22 0.706
2r3r 6SCCyclin-dependent kinase 2 2.7.11.22 0.695
1w0x OLOCyclin-dependent kinase 2 2.7.11.22 0.692
2a0c CK9Cyclin-dependent kinase 2 2.7.11.22 0.688
4bgh 3I6Cyclin-dependent kinase 2 2.7.11.22 0.688
3le6 2BZCyclin-dependent kinase 2 2.7.11.22 0.683
1y8y CT7Cyclin-dependent kinase 2 2.7.11.22 0.680
2r3j SCJCyclin-dependent kinase 2 2.7.11.22 0.678
3dog NNNCyclin-dependent kinase 2 2.7.11.22 0.677
2btr U73Cyclin-dependent kinase 2 2.7.11.22 0.670
2vtj LZ4Cyclin-dependent kinase 2 2.7.11.22 0.665
4fkv 61KCyclin-dependent kinase 2 2.7.11.22 0.665
1ckp PVBCyclin-dependent kinase 2 2.7.11.22 0.660
2c6t DT5Cyclin-dependent kinase 2 2.7.11.22 0.660
3ezr EZRCyclin-dependent kinase 2 2.7.11.22 0.659
3r1s X73Cyclin-dependent kinase 2 2.7.11.22 0.659
1gii 1PUCyclin-dependent kinase 2 2.7.11.22 0.658
4fkt 48KCyclin-dependent kinase 2 2.7.11.22 0.654
2vts LZCCyclin-dependent kinase 2 2.7.11.22 0.650