Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2r3k SCQ Cyclin-dependent kinase 2 2.7.11.22

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2r3k SCQCyclin-dependent kinase 2 2.7.11.22 0.898
2r3m SCXCyclin-dependent kinase 2 2.7.11.22 0.808
2r3l SCWCyclin-dependent kinase 2 2.7.11.22 0.764
2r3j SCJCyclin-dependent kinase 2 2.7.11.22 0.748
2c68 CT6Cyclin-dependent kinase 2 2.7.11.22 0.712
2r3q 5SCCyclin-dependent kinase 2 2.7.11.22 0.708
1w0x OLOCyclin-dependent kinase 2 2.7.11.22 0.694
2r3p 3SCCyclin-dependent kinase 2 2.7.11.22 0.693
2r3r 6SCCyclin-dependent kinase 2 2.7.11.22 0.690
2a0c CK9Cyclin-dependent kinase 2 2.7.11.22 0.687
2r3o 2SCCyclin-dependent kinase 2 2.7.11.22 0.686
2r3i SCFCyclin-dependent kinase 2 2.7.11.22 0.682
4kd1 1QKCyclin-dependent kinase 2 2.7.11.22 0.678
1ckp PVBCyclin-dependent kinase 2 2.7.11.22 0.677
3nup 3NUCyclin-dependent kinase 6 2.7.11.22 0.670
3qx2 X63Cyclin-dependent kinase 2 2.7.11.22 0.667
1y91 CT9Cyclin-dependent kinase 2 2.7.11.22 0.662
3r7y Z04Cyclin-dependent kinase 2 2.7.11.22 0.661
4fkv 61KCyclin-dependent kinase 2 2.7.11.22 0.658
4fkw 62KCyclin-dependent kinase 2 2.7.11.22 0.655
1ke7 LS3Cyclin-dependent kinase 2 2.7.11.22 0.652
2r3f SC8Cyclin-dependent kinase 2 2.7.11.22 0.650
3pj8 404Cyclin-dependent kinase 2 2.7.11.22 0.650