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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2qpy DHT Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2qpy DHTAndrogen receptor / 1.208
2z4j DHTAndrogen receptor / 1.117
1t7f DHTAndrogen receptor / 1.096
2piu DHTAndrogen receptor / 1.089
2pkl DHTAndrogen receptor / 1.075
2piw DHTAndrogen receptor / 1.071
1t7m DHTAndrogen receptor / 1.067
1t7r DHTAndrogen receptor / 1.067
2pix DHTAndrogen receptor / 1.065
4k7a DHTAndrogen receptor / 1.060
2pip DHTAndrogen receptor / 1.046
1t5z DHTAndrogen receptor / 1.041
1t73 DHTAndrogen receptor / 1.026
4oez DHTAndrogen receptor / 1.018
2ylo TESAndrogen receptor / 0.965
2ylq TESAndrogen receptor / 0.936
2q7j TESAndrogen receptor / 0.907
2yhd TESAndrogen receptor / 0.904
1t76 DHTAndrogen receptor / 0.899
1t79 DHTAndrogen receptor / 0.889
2ylp TESAndrogen receptor / 0.889
2q7k TESAndrogen receptor / 0.880
2am9 TESAndrogen receptor / 0.878
2q7i TESAndrogen receptor / 0.873
2pio DHTAndrogen receptor / 0.871
2ao6 R18Androgen receptor / 0.844
2q7l TESAndrogen receptor / 0.833
1gs4 ZK5Androgen receptor / 0.825
1xow R18Androgen receptor / 0.821
2pir DHTAndrogen receptor / 0.805
1xq3 R18Androgen receptor / 0.796
2amb 17HAndrogen receptor / 0.758
4oea DHTAndrogen receptor / 0.746
1xj7 DHTAndrogen receptor / 0.713
2pit DHTAndrogen receptor / 0.712
1lnm DTXBilin-binding protein / 0.705
4e5l DBHPolymerase acidic protein / 0.705
2abi 1CAMineralocorticoid receptor / 0.704
1lke DOGBilin-binding protein / 0.697
1t74 DHTAndrogen receptor / 0.697
1f5f DHTSex hormone-binding globulin / 0.696
1kdk DHTSex hormone-binding globulin / 0.690
4oey DHTAndrogen receptor / 0.690
2piv DHTAndrogen receptor / 0.689
2piq DHTAndrogen receptor / 0.679
1t63 DHTAndrogen receptor / 0.676
4at2 ASDPossible succinate dehydrogenase / 0.676
3uzz TES3-oxo-5-beta-steroid 4-dehydrogenase / 0.673
4ofu DHTAndrogen receptor / 0.673
2aax PDNMineralocorticoid receptor / 0.672
1t7t DHTAndrogen receptor / 0.671
3vhu SNLMineralocorticoid receptor / 0.671
2aa7 1CAMineralocorticoid receptor / 0.666
2ama DHTAndrogen receptor / 0.666
4oed DHTAndrogen receptor / 0.666
1jtv TESEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.665
4apu A2KProgesterone receptor / 0.665
1d2s DHTSex hormone-binding globulin / 0.664
1sr7 MOFProgesterone receptor / 0.663
5ag6 MYAGlycylpeptide N-tetradecanoyltransferase / 0.663
1yb1 AOIEstradiol 17-beta-dehydrogenase 11 1.1.1.62 0.661
3cmf PDN3-oxo-5-beta-steroid 4-dehydrogenase / 0.661
4cav MYAGlycylpeptide N-tetradecanoyltransferase 2.3.1.97 0.661
2lba CHOFatty acid binding protein 6 / 0.660
1t65 DHTAndrogen receptor / 0.659
4c49 HCYCorticosteroid-binding globulin / 0.658
3akn 11DFatty acid-binding protein, intestinal / 0.657
3zqt TESAndrogen receptor / 0.655
4cax MYAGlycylpeptide N-tetradecanoyltransferase 2.3.1.97 0.654
1irj CPSProtein S100-A9 / 0.653
4ple CPSNuclear receptor subfamily 5 group A member 2 / 0.652
4ofr DHTAndrogen receptor / 0.651
2wuu NHWGlycylpeptide N-tetradecanoyltransferase / 0.650