Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2qg2 A91 Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2qg2 A91Heat shock protein HSP 90-alpha / 0.974
3ft8 MOJHeat shock protein HSP 90-alpha / 0.756
3omu IBDHeat shock protein 83 / 0.681
2wi6 ZZ6Heat shock protein HSP 90-alpha / 0.660
2yki YKIHeat shock protein HSP 90-alpha / 0.658
4egi B2JHeat shock protein HSP 90-alpha / 0.656