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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2q7l TES Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2q7l TESAndrogen receptor / 1.059
2q7i TESAndrogen receptor / 1.047
1t7r DHTAndrogen receptor / 1.044
1t79 DHTAndrogen receptor / 1.042
1t7t DHTAndrogen receptor / 1.033
1t7m DHTAndrogen receptor / 1.024
2q7j TESAndrogen receptor / 1.016
1t76 DHTAndrogen receptor / 0.994
2am9 TESAndrogen receptor / 0.993
1t65 DHTAndrogen receptor / 0.990
2ylq TESAndrogen receptor / 0.982
1t73 DHTAndrogen receptor / 0.978
2pit DHTAndrogen receptor / 0.976
4ofu DHTAndrogen receptor / 0.965
4k7a DHTAndrogen receptor / 0.961
2pip DHTAndrogen receptor / 0.959
1t5z DHTAndrogen receptor / 0.958
3zqt TESAndrogen receptor / 0.949
1t74 DHTAndrogen receptor / 0.948
2yhd TESAndrogen receptor / 0.938
4oed DHTAndrogen receptor / 0.921
1gs4 ZK5Androgen receptor / 0.852
2piu DHTAndrogen receptor / 0.837
2qpy DHTAndrogen receptor / 0.833
2piv DHTAndrogen receptor / 0.822
4oez DHTAndrogen receptor / 0.820
2ylo TESAndrogen receptor / 0.813
4ofr DHTAndrogen receptor / 0.811
1t7f DHTAndrogen receptor / 0.809
4hlw TESAndrogen receptor / 0.806
2ao6 R18Androgen receptor / 0.804
2z4j DHTAndrogen receptor / 0.795
2pio DHTAndrogen receptor / 0.794
2amb 17HAndrogen receptor / 0.791
1t63 DHTAndrogen receptor / 0.790
1xow R18Androgen receptor / 0.787
2pnu ENMAndrogen receptor / 0.778
4oea DHTAndrogen receptor / 0.769
2q7k TESAndrogen receptor / 0.767
4oey DHTAndrogen receptor / 0.754
2ama DHTAndrogen receptor / 0.734
2ylp TESAndrogen receptor / 0.720
2piq DHTAndrogen receptor / 0.716
2pkl DHTAndrogen receptor / 0.702
1xq3 R18Androgen receptor / 0.701
4e5l DBHPolymerase acidic protein / 0.696
1e3k R18Progesterone receptor / 0.684
1xj7 DHTAndrogen receptor / 0.684
3g1r FIT3-oxo-5-beta-steroid 4-dehydrogenase / 0.678
1yb1 AOIEstradiol 17-beta-dehydrogenase 11 1.1.1.62 0.677
2piw DHTAndrogen receptor / 0.677
1sqn NDRProgesterone receptor / 0.674
1d2s DHTSex hormone-binding globulin / 0.664
1xf0 ASDAldo-keto reductase family 1 member C3 / 0.664
1jtv TESEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.657
1lhw ESMSex hormone-binding globulin / 0.656
1qyw 5SDEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.654
2aa7 1CAMineralocorticoid receptor / 0.653
2abi 1CAMineralocorticoid receptor / 0.652
4at2 ASDPossible succinate dehydrogenase / 0.652