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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2q7k TES Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2q7k TESAndrogen receptor / 1.095
2ylp TESAndrogen receptor / 1.040
2q7i TESAndrogen receptor / 1.038
1t7r DHTAndrogen receptor / 1.036
2ama DHTAndrogen receptor / 1.007
4hlw TESAndrogen receptor / 0.991
1t65 DHTAndrogen receptor / 0.988
2ylq TESAndrogen receptor / 0.986
2pio DHTAndrogen receptor / 0.983
1t74 DHTAndrogen receptor / 0.976
4oea DHTAndrogen receptor / 0.974
1t7f DHTAndrogen receptor / 0.973
4oey DHTAndrogen receptor / 0.970
1t73 DHTAndrogen receptor / 0.965
2pip DHTAndrogen receptor / 0.965
2pkl DHTAndrogen receptor / 0.965
2pit DHTAndrogen receptor / 0.963
4oez DHTAndrogen receptor / 0.960
4ofr DHTAndrogen receptor / 0.954
1t5z DHTAndrogen receptor / 0.952
2z4j DHTAndrogen receptor / 0.942
2piq DHTAndrogen receptor / 0.932
1t79 DHTAndrogen receptor / 0.931
1t76 DHTAndrogen receptor / 0.927
1t7m DHTAndrogen receptor / 0.926
2piw DHTAndrogen receptor / 0.926
2pix DHTAndrogen receptor / 0.923
4oed DHTAndrogen receptor / 0.923
2qpy DHTAndrogen receptor / 0.880
1xj7 DHTAndrogen receptor / 0.850
1xq3 R18Androgen receptor / 0.842
1xow R18Androgen receptor / 0.838
1t7t DHTAndrogen receptor / 0.829
1e3g R18Androgen receptor / 0.791
2q7j TESAndrogen receptor / 0.789
1t63 DHTAndrogen receptor / 0.788
2piv DHTAndrogen receptor / 0.786
2am9 TESAndrogen receptor / 0.775
4ofu DHTAndrogen receptor / 0.773
1gs4 ZK5Androgen receptor / 0.772
2q7l TESAndrogen receptor / 0.767
2amb 17HAndrogen receptor / 0.765
2ylo TESAndrogen receptor / 0.728
2aax PDNMineralocorticoid receptor / 0.725
3uzz ASD3-oxo-5-beta-steroid 4-dehydrogenase / 0.723
2pir DHTAndrogen receptor / 0.701
1xf0 ASDAldo-keto reductase family 1 member C3 / 0.695
3cas ASD3-oxo-5-beta-steroid 4-dehydrogenase / 0.694
3w5q 3KLVitamin D3 receptor / 0.694
4e5l DBHPolymerase acidic protein / 0.694
2piu DHTAndrogen receptor / 0.692
1qyw 5SDEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.689
1y9r 1CAMineralocorticoid receptor / 0.683
3up0 D7SaceDAF-12 / 0.682
3w5t LHPVitamin D3 receptor / 0.681
4at2 ASDPossible succinate dehydrogenase / 0.680
2ao6 R18Androgen receptor / 0.679
1e3k R18Progesterone receptor / 0.677
1lho AOMSex hormone-binding globulin / 0.677
1lri CLRBeta-elicitin cryptogein / 0.677
1yb1 AOIEstradiol 17-beta-dehydrogenase 11 1.1.1.62 0.672
2yhd TESAndrogen receptor / 0.671
1jtv TESEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.669
4k7a DHTAndrogen receptor / 0.664
4q0a 4OAVitamin D3 receptor A / 0.664
3iw1 ASDSteroid C26-monooxygenase 1.14.13.141 0.663
1xu7 CPSCorticosteroid 11-beta-dehydrogenase isozyme 1 1.1.1.146 0.659
1ot7 CHCBile acid receptor / 0.656
2yja ESTEstrogen receptor / 0.656
1lhu ESTSex hormone-binding globulin / 0.655
2j7x ESTEstrogen receptor beta / 0.654
2lba CHOFatty acid binding protein 6 / 0.653
3w5p 4OAVitamin D3 receptor / 0.651
1lhn AONSex hormone-binding globulin / 0.650