scPDB - Distribution of Binding mode Similarity values of 2q15 entry / Site 1

Distribution of Interaction pattern similarity measured by Grim

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Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2q15	3MR	Beta-secretase 1	3.4.23.46

Complex with similar interaction patterns:

PDB ID	HET	Uniprot Name	EC Number	Binding Mode Similarity
2q15	3MR	Beta-secretase 1	3.4.23.46	1.205
2wjo	QUD	Beta-secretase 1	3.4.23.46	0.781
3l5b	BDO	Beta-secretase 1	3.4.23.46	0.693
3rth	RTH	Beta-secretase 1	3.4.23.46	0.668
4djw	0KP	Beta-secretase 1	3.4.23.46	0.662
4b72	2FB	Beta-secretase 1	3.4.23.46	0.654