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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2pow I7C Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2pow I7CCarbonic anhydrase 2 4.2.1.1 0.953
3l14 I7BCarbonic anhydrase 2 4.2.1.1 0.781
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.758
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.728
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.725
3myq E27Carbonic anhydrase 2 4.2.1.1 0.720
2q1q OSPCarbonic anhydrase 2 4.2.1.1 0.718
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.702
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.698
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.698
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.698
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.696
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.694
3bl1 BL1Carbonic anhydrase 2 4.2.1.1 0.694
1cnx EG2Carbonic anhydrase 2 4.2.1.1 0.691
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.691
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.690
3igp DT7Carbonic anhydrase 2 4.2.1.1 0.690
4knn E1FCarbonic anhydrase 13 4.2.1.1 0.690
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.689
4knm E1ECarbonic anhydrase 13 4.2.1.1 0.688
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.684
4kni E1ECarbonic anhydrase 2 4.2.1.1 0.684
3f7u AG4Carbonic anhydrase 4 4.2.1.1 0.683
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.679
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.676
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.675
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.674
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.673
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.671
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.671
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.670
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.669
1okm SABCarbonic anhydrase 2 4.2.1.1 0.666
2nn7 M29Carbonic anhydrase 1 4.2.1.1 0.666
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.664
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.662
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.662
2eu3 FF3Carbonic anhydrase 2 4.2.1.1 0.661
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.661
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.660
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.660
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.659
3mdz EZLCarbonic anhydrase 7 4.2.1.1 0.659
3f7b AG5Carbonic anhydrase 4 4.2.1.1 0.658
3mho J43Carbonic anhydrase 2 4.2.1.1 0.657
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.657
3s9t E49Carbonic anhydrase 2 4.2.1.1 0.656
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.655
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.654
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.652
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.652
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.652