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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2pf8 NDP Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2pf8 NDPAldose reductase 1.1.1.21 1.609
2pev NDPAldose reductase 1.1.1.21 1.607
1x98 NAPAldose reductase 1.1.1.21 1.587
1z8a NAPAldose reductase 1.1.1.21 1.572
2j8t NAPAldose reductase 1.1.1.21 1.570
3q67 NAPAldose reductase 1.1.1.21 1.565
1x96 NAPAldose reductase 1.1.1.21 1.528
2acq NAPAldose reductase 1.1.1.21 1.511
2iq0 NAPAldose reductase 1.1.1.21 1.511
1ads NAPAldose reductase 1.1.1.21 1.484
3v36 NAPAldose reductase 1.1.1.21 1.484
2acs NAPAldose reductase 1.1.1.21 1.460
2pfh NDPAldose reductase 1.1.1.21 1.443
2acu NAPAldose reductase 1.1.1.21 1.441
3q65 NAPAldose reductase 1.1.1.21 1.347
1ef3 NAPAldose reductase 1.1.1.21 1.312
1ah4 NAPAldose reductase 1.1.1.21 1.304
3h7u NAPNADPH-dependent aldo-keto reductase, chloroplastic / 1.304
3qkz NAPAldose reductase-related protein 1 1.1.1.21 1.261
2bgs NDPAldose reductase 1.1.1.21 1.251
5c7h NDPPutative oxidoreductase / 1.237
3h7r NAPAldo-keto reductase family 4 member C8 / 1.225
3o3r NAPAldose reductase-related protein 1 1.1.1.21 1.218
1q5m NDPProstaglandin-E(2) 9-reductase 1.1.1.189 1.208
1az2 NAPAldose reductase 1.1.1.21 1.148
3bv7 NAP3-oxo-5-beta-steroid 4-dehydrogenase / 1.142
4xzn NAPAldo-keto reductase family 1 member B10 1.1.1 1.140
3uzw NAP3-oxo-5-beta-steroid 4-dehydrogenase / 1.127
2vdg NDPAldose reductase 1.1.1.21 1.126
4g5d NDPProstaglandin F synthase 1.1.1.188 1.105
3g1r NAP3-oxo-5-beta-steroid 4-dehydrogenase / 1.066
3buv NAP3-oxo-5-beta-steroid 4-dehydrogenase / 1.049
4ijr NDPD-arabinose dehydrogenase [NAD(P)+] heavy chain 1.1.1.117 1.048
4pmj NAPPutative oxidoreductase / 1.037
4xzm NAPAldo-keto reductase family 1 member B10 1.1.1 1.024
3wcz NAPAldo-keto reductase AKR2E4 / 1.018
1hqt NAPAlcohol dehydrogenase [NADP(+)] 1.1.1.2 1.016
1k8c NAPNAD(P)H-dependent D-xylose reductase 1.1.1.307 1.012
1s1r NAPAldo-keto reductase family 1 member C3 / 0.978
4dz5 NAPAldo-keto reductase family 1 member C3 / 0.976
3wbw NDPPutative 2,5-diketo-D-gluconic acid reductase / 0.970
3dop NAP3-oxo-5-beta-steroid 4-dehydrogenase / 0.964
2fvl NAPAldo-keto reductase family 1 member C4 1.1.1.225 0.943
1a80 NDP2,5-diketo-D-gluconic acid reductase A 1.1.1.346 0.942
1r38 NAPNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.942
4jtq NAPAldo-keto reductase family 1 member C2 / 0.929
3caq NDP3-oxo-5-beta-steroid 4-dehydrogenase / 0.916
1zgd NAPChalcone reductase / 0.913
1mi3 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.910
1c9w NAPAldose reductase-related protein 2 / 0.907
2hdj NDPAldo-keto reductase family 1 member C2 / 0.900
1s1p NAPAldo-keto reductase family 1 member C3 / 0.871
4l1x NAPAldo-keto reductase family 1 member C2 / 0.863
4xo7 NAPAldo-keto reductase family 1 member C2 / 0.858
1vp5 NAPOxidoreductase, aldo/keto reductase family / 0.854
1m9h NAD2,5-diketo-D-gluconic acid reductase A 1.1.1.346 0.841
1ye4 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.837
4jq3 NAPAldo-keto reductase family 1 member C2 / 0.820
3ln3 NADAldo-keto reductase family 1 member C13 / 0.791
1ye6 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.786
1sm9 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.781
2hej NDPAldo-keto reductase family 1 member C21 1.1.1 0.754
1z9a NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.752
3wg6 NDPNADPH-dependent conjugated polyketone reductase C1 / 0.752
1ye6 NAPNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.741
2he5 NDPAldo-keto reductase family 1 member C21 1.1.1 0.716
2bp1 NDPAflatoxin B1 aldehyde reductase member 2 / 0.702
1gve NAPAflatoxin B1 aldehyde reductase member 3 1 0.699
1lwi NAP3-alpha-hydroxysteroid dehydrogenase 1.1.1.50 0.697
4h8n NDPNADPH-dependent conjugated polyketone reductase C2 / 0.694
2clp NDPAflatoxin B1 aldehyde reductase member 3 / 0.676
1og6 NAPOxidoreductase YdhF 1 0.670
4jtd NAPVoltage-gated potassium channel subunit beta-2 / 0.657
2p5n NDPAldo-keto reductase family 1 member C21 1.1.1 0.654