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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2pev NDP Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2pev NDPAldose reductase 1.1.1.21 1.613
2pf8 NDPAldose reductase 1.1.1.21 1.607
1x98 NAPAldose reductase 1.1.1.21 1.591
2j8t NAPAldose reductase 1.1.1.21 1.574
1z8a NAPAldose reductase 1.1.1.21 1.572
3q67 NAPAldose reductase 1.1.1.21 1.569
1x96 NAPAldose reductase 1.1.1.21 1.529
2acq NAPAldose reductase 1.1.1.21 1.511
2iq0 NAPAldose reductase 1.1.1.21 1.508
1ads NAPAldose reductase 1.1.1.21 1.484
3v36 NAPAldose reductase 1.1.1.21 1.484
2acs NAPAldose reductase 1.1.1.21 1.461
2pfh NDPAldose reductase 1.1.1.21 1.461
2acu NAPAldose reductase 1.1.1.21 1.441
3q65 NAPAldose reductase 1.1.1.21 1.361
3h7u NAPNADPH-dependent aldo-keto reductase, chloroplastic / 1.319
1ef3 NAPAldose reductase 1.1.1.21 1.296
1ah4 NAPAldose reductase 1.1.1.21 1.288
3qkz NAPAldose reductase-related protein 1 1.1.1.21 1.264
2bgs NDPAldose reductase 1.1.1.21 1.259
4pmj NAPPutative oxidoreductase / 1.246
5c7h NDPPutative oxidoreductase / 1.236
3h7r NAPAldo-keto reductase family 4 member C8 / 1.219
3o3r NAPAldose reductase-related protein 1 1.1.1.21 1.214
1q5m NDPProstaglandin-E(2) 9-reductase 1.1.1.189 1.208
1az2 NAPAldose reductase 1.1.1.21 1.141
4xzn NAPAldo-keto reductase family 1 member B10 1.1.1 1.130
3bv7 NAP3-oxo-5-beta-steroid 4-dehydrogenase / 1.128
3uzw NAP3-oxo-5-beta-steroid 4-dehydrogenase / 1.127
4g5d NDPProstaglandin F synthase 1.1.1.188 1.126
2vdg NDPAldose reductase 1.1.1.21 1.111
4ijr NDPD-arabinose dehydrogenase [NAD(P)+] heavy chain 1.1.1.117 1.062
4xo7 NAPAldo-keto reductase family 1 member C2 / 1.060
3g1r NAP3-oxo-5-beta-steroid 4-dehydrogenase / 1.051
4xzm NAPAldo-keto reductase family 1 member B10 1.1.1 1.027
3wcz NAPAldo-keto reductase AKR2E4 / 1.018
1hqt NAPAlcohol dehydrogenase [NADP(+)] 1.1.1.2 1.005
3dop NAP3-oxo-5-beta-steroid 4-dehydrogenase / 0.998
1vp5 NAPOxidoreductase, aldo/keto reductase family / 0.979
1a80 NDP2,5-diketo-D-gluconic acid reductase A 1.1.1.346 0.978
1s1r NAPAldo-keto reductase family 1 member C3 / 0.978
1k8c NAPNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.970
3wbw NDPPutative 2,5-diketo-D-gluconic acid reductase / 0.970
3buv NAP3-oxo-5-beta-steroid 4-dehydrogenase / 0.954
2fvl NAPAldo-keto reductase family 1 member C4 1.1.1.225 0.952
3caq NDP3-oxo-5-beta-steroid 4-dehydrogenase / 0.917
1zgd NAPChalcone reductase / 0.913
2hdj NDPAldo-keto reductase family 1 member C2 / 0.906
4dz5 NAPAldo-keto reductase family 1 member C3 / 0.899
1mi3 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.894
4jtq NAPAldo-keto reductase family 1 member C2 / 0.891
1c9w NAPAldose reductase-related protein 2 / 0.884
1r38 NAPNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.867
1s1p NAPAldo-keto reductase family 1 member C3 / 0.862
1ye4 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.827
1m9h NAD2,5-diketo-D-gluconic acid reductase A 1.1.1.346 0.826
4jq3 NAPAldo-keto reductase family 1 member C2 / 0.820
4l1x NAPAldo-keto reductase family 1 member C2 / 0.816
3ln3 NADAldo-keto reductase family 1 member C13 / 0.805
1sm9 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.791
1ye6 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.786
2clp NDPAflatoxin B1 aldehyde reductase member 3 / 0.758
1z9a NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.756
2hej NDPAldo-keto reductase family 1 member C21 1.1.1 0.754
1ye6 NAPNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.725
2he5 NDPAldo-keto reductase family 1 member C21 1.1.1 0.711
2bp1 NDPAflatoxin B1 aldehyde reductase member 2 / 0.702
1gve NAPAflatoxin B1 aldehyde reductase member 3 1 0.699
1lwi NAP3-alpha-hydroxysteroid dehydrogenase 1.1.1.50 0.696
4h8n NDPNADPH-dependent conjugated polyketone reductase C2 / 0.693
1lqa NDPProtein tas / 0.663
2p5n NDPAldo-keto reductase family 1 member C21 1.1.1 0.658
4jtd NAPVoltage-gated potassium channel subunit beta-2 / 0.657