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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2pdj 393 Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2pdj 393Aldose reductase 1.1.1.21 1.008
2pdc 393Aldose reductase 1.1.1.21 0.966
3m64 393Aldose reductase 1.1.1.21 0.962
2ikj 393Aldose reductase 1.1.1.21 0.953
2pzn 393Aldose reductase 1.1.1.21 0.949
3mc5 393Aldose reductase 1.1.1.21 0.923
2pdp 393Aldose reductase 1.1.1.21 0.922
2pdu 393Aldose reductase 1.1.1.21 0.865
3m4h 388Aldose reductase 1.1.1.21 0.857
3ld5 LDTAldose reductase 1.1.1.21 0.841
3t42 3T4Aldose reductase 1.1.1.21 0.840
3ghu LDTAldose reductase 1.1.1.21 0.826
3lbo LDTAldose reductase 1.1.1.21 0.823
3lql LDTAldose reductase 1.1.1.21 0.822
2qxw LDTAldose reductase 1.1.1.21 0.810
3ghs LDTAldose reductase 1.1.1.21 0.810
3ghr LDTAldose reductase 1.1.1.21 0.809
1us0 LDTAldose reductase 1.1.1.21 0.806
2i16 LDTAldose reductase 1.1.1.21 0.806
2i17 LDTAldose reductase 1.1.1.21 0.806
3ght LDTAldose reductase 1.1.1.21 0.806
2iki 388Aldose reductase 1.1.1.21 0.801
3lz5 LDTAldose reductase 1.1.1.21 0.789
2fz9 ZSTAldose reductase 1.1.1.21 0.786
2pdf ZSTAldose reductase 1.1.1.21 0.786
2pdm ZSTAldose reductase 1.1.1.21 0.785
2dv0 ZSTAldose reductase 1.1.1.21 0.776
4gca 2X9Aldose reductase 1.1.1.21 0.769
2hvn ZSTAldose reductase 1.1.1.21 0.755
2dux ZSTAldose reductase 1.1.1.21 0.754
2fz8 ZSTAldose reductase 1.1.1.21 0.753
2pdn 47DAldose reductase 1.1.1.21 0.753
2pd5 ZSTAldose reductase 1.1.1.21 0.752
2hv5 ZSTAldose reductase 1.1.1.21 0.751
2hvo ZSTAldose reductase 1.1.1.21 0.750
2pdb ZSTAldose reductase 1.1.1.21 0.748
2pdh 47DAldose reductase 1.1.1.21 0.741
2duz ZSTAldose reductase 1.1.1.21 0.740
3m0i ZSTAldose reductase 1.1.1.21 0.740
2pdx ZSTAldose reductase 1.1.1.21 0.738
1t40 ID5Aldose reductase 1.1.1.21 0.730
2pdi ZSTAldose reductase 1.1.1.21 0.730
2pdq 47DAldose reductase 1.1.1.21 0.729
1frb ZSTAldose reductase-related protein 2 / 0.719
4yu1 53NAldose reductase 1.1.1.21 0.715
2fzd TOLAldose reductase 1.1.1.21 0.698
2is7 2CLAldose reductase 1.1.1.21 0.688
1t41 ID5Aldose reductase 1.1.1.21 0.687
1iei ZESAldose reductase 1.1.1.21 0.684
3mb9 ZSTAldose reductase 1.1.1.21 0.679
2pdl TOLAldose reductase 1.1.1.21 0.677
1zua TOLAldo-keto reductase family 1 member B10 1.1.1 0.676
2ikh LITAldose reductase 1.1.1.21 0.676
3u2c SUZAldose reductase 1.1.1.21 0.675
2pdg 47DAldose reductase 1.1.1.21 0.672
2inz OHPAldose reductase 1.1.1.21 0.667
1pwl BFIAldose reductase 1.1.1.21 0.663
1z89 62PAldose reductase 1.1.1.21 0.651