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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2pdi ZST Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2pdi ZSTAldose reductase 1.1.1.21 1.263
2fz8 ZSTAldose reductase 1.1.1.21 1.182
2duz ZSTAldose reductase 1.1.1.21 1.179
3m0i ZSTAldose reductase 1.1.1.21 1.141
2pdb ZSTAldose reductase 1.1.1.21 1.140
2hvn ZSTAldose reductase 1.1.1.21 1.122
3len ZSTAldose reductase 1.1.1.21 1.110
3mb9 ZSTAldose reductase 1.1.1.21 1.089
2pd5 ZSTAldose reductase 1.1.1.21 1.078
2fz9 ZSTAldose reductase 1.1.1.21 1.072
2hv5 ZSTAldose reductase 1.1.1.21 1.042
2hvo ZSTAldose reductase 1.1.1.21 1.024
2pdx ZSTAldose reductase 1.1.1.21 0.972
2pdm ZSTAldose reductase 1.1.1.21 0.935
2pdq 47DAldose reductase 1.1.1.21 0.920
1frb ZSTAldose reductase-related protein 2 / 0.896
2dux ZSTAldose reductase 1.1.1.21 0.888
2dv0 ZSTAldose reductase 1.1.1.21 0.886
2pdf ZSTAldose reductase 1.1.1.21 0.870
1z3n 3NAAldose reductase 1.1.1.21 0.833
2pdg 47DAldose reductase 1.1.1.21 0.827
3ghs LDTAldose reductase 1.1.1.21 0.796
4gca 2X9Aldose reductase 1.1.1.21 0.796
2pdp 393Aldose reductase 1.1.1.21 0.768
3g5e Q74Aldose reductase 1.1.1.21 0.761
3m4h 388Aldose reductase 1.1.1.21 0.747
2pdj 393Aldose reductase 1.1.1.21 0.730
1us0 LDTAldose reductase 1.1.1.21 0.726
2pdu 393Aldose reductase 1.1.1.21 0.722
1t41 ID5Aldose reductase 1.1.1.21 0.713
2inz OHPAldose reductase 1.1.1.21 0.699
2nvc ITAAldose reductase 1.1.1.21 0.692
2pzn 393Aldose reductase 1.1.1.21 0.689
3lbo LDTAldose reductase 1.1.1.21 0.688
2ikh LITAldose reductase 1.1.1.21 0.684
2pdh 47DAldose reductase 1.1.1.21 0.684
2pdn 47DAldose reductase 1.1.1.21 0.684
3ld5 LDTAldose reductase 1.1.1.21 0.683
2ikj 393Aldose reductase 1.1.1.21 0.676
3m64 393Aldose reductase 1.1.1.21 0.675
3lz5 LDTAldose reductase 1.1.1.21 0.673
3ghr LDTAldose reductase 1.1.1.21 0.671
2i17 LDTAldose reductase 1.1.1.21 0.670
2qxw LDTAldose reductase 1.1.1.21 0.670
3lql LDTAldose reductase 1.1.1.21 0.669
3s3g TLTAldose reductase 1.1.1.21 0.665
3mc5 393Aldose reductase 1.1.1.21 0.656
2i16 LDTAldose reductase 1.1.1.21 0.655