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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2pdb ZST Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2pdb ZSTAldose reductase 1.1.1.21 1.264
2pdi ZSTAldose reductase 1.1.1.21 1.140
2duz ZSTAldose reductase 1.1.1.21 1.132
3m0i ZSTAldose reductase 1.1.1.21 1.114
2hvn ZSTAldose reductase 1.1.1.21 1.089
2dv0 ZSTAldose reductase 1.1.1.21 1.079
2fz8 ZSTAldose reductase 1.1.1.21 1.074
3len ZSTAldose reductase 1.1.1.21 1.060
2hv5 ZSTAldose reductase 1.1.1.21 1.016
2fz9 ZSTAldose reductase 1.1.1.21 1.009
2pdx ZSTAldose reductase 1.1.1.21 0.964
2pd5 ZSTAldose reductase 1.1.1.21 0.962
1z3n 3NAAldose reductase 1.1.1.21 0.899
3mb9 ZSTAldose reductase 1.1.1.21 0.896
2hvo ZSTAldose reductase 1.1.1.21 0.884
2pdq 47DAldose reductase 1.1.1.21 0.873
2dux ZSTAldose reductase 1.1.1.21 0.872
4gca 2X9Aldose reductase 1.1.1.21 0.845
1frb ZSTAldose reductase-related protein 2 / 0.789
1t40 ID5Aldose reductase 1.1.1.21 0.782
2pdm ZSTAldose reductase 1.1.1.21 0.767
2pdf ZSTAldose reductase 1.1.1.21 0.762
2pdp 393Aldose reductase 1.1.1.21 0.761
2pdh 47DAldose reductase 1.1.1.21 0.753
2pdu 393Aldose reductase 1.1.1.21 0.751
3g5e Q74Aldose reductase 1.1.1.21 0.749
2pdj 393Aldose reductase 1.1.1.21 0.748
2pzn 393Aldose reductase 1.1.1.21 0.737
2pdg 47DAldose reductase 1.1.1.21 0.730
3m64 393Aldose reductase 1.1.1.21 0.726
2iki 388Aldose reductase 1.1.1.21 0.701
3mc5 393Aldose reductase 1.1.1.21 0.697
2ikj 393Aldose reductase 1.1.1.21 0.691
3ld5 LDTAldose reductase 1.1.1.21 0.691
2pdn 47DAldose reductase 1.1.1.21 0.681
2pdc 393Aldose reductase 1.1.1.21 0.677
3lz5 LDTAldose reductase 1.1.1.21 0.670
2ikh LITAldose reductase 1.1.1.21 0.666
3t42 3T4Aldose reductase 1.1.1.21 0.662
3ghr LDTAldose reductase 1.1.1.21 0.650