scPDB - Distribution of Binding mode Similarity values of 2p1t entry / Site 1

Distribution of Interaction pattern similarity measured by Grim

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Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2p1t	3TN	Retinoic acid receptor RXR-alpha

Complex with similar interaction patterns:

PDB ID	HET	Uniprot Name	EC Number	Binding Mode Similarity
2p1t	3TN	Retinoic acid receptor RXR-alpha	/	1.278
2p1v	5TN	Retinoic acid receptor RXR-alpha	/	0.804
2p1u	4TN	Retinoic acid receptor RXR-alpha	/	0.748
4dm6	TTB	Retinoic acid receptor beta	/	0.677